Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS20585

Experiment: R2A 15C; 144 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS20580 and ABZR88_RS20585 are separated by 84 nucleotidesABZR88_RS20585 and ABZR88_RS20590 are separated by 242 nucleotides ABZR88_RS20580: ABZR88_RS20580 - proline iminopeptidase-family hydrolase, at 4,983,010 to 4,984,029 _RS20580 ABZR88_RS20585: ABZR88_RS20585 - TetR/AcrR family transcriptional regulator, at 4,984,114 to 4,984,683 _RS20585 ABZR88_RS20590: ABZR88_RS20590 - MlaD family protein, at 4,984,926 to 4,985,684 _RS20590 Position (kb) 4984 4985Strain fitness (log2 ratio) -1 0 1at 4983.238 kb on + strand, within ABZR88_RS20580at 4983.239 kb on - strand, within ABZR88_RS20580at 4983.293 kb on - strand, within ABZR88_RS20580at 4983.328 kb on - strand, within ABZR88_RS20580at 4983.362 kb on + strand, within ABZR88_RS20580at 4983.409 kb on + strand, within ABZR88_RS20580at 4983.498 kb on + strand, within ABZR88_RS20580at 4983.525 kb on - strand, within ABZR88_RS20580at 4983.701 kb on + strand, within ABZR88_RS20580at 4983.702 kb on - strand, within ABZR88_RS20580at 4983.826 kb on - strand, within ABZR88_RS20580at 4983.847 kb on + strand, within ABZR88_RS20580at 4983.911 kb on - strand, within ABZR88_RS20580at 4983.934 kb on - strandat 4983.995 kb on + strandat 4983.996 kb on - strandat 4984.125 kb on - strandat 4984.241 kb on - strand, within ABZR88_RS20585at 4984.388 kb on + strand, within ABZR88_RS20585at 4984.531 kb on + strand, within ABZR88_RS20585at 4984.684 kb on + strandat 4984.685 kb on - strandat 4984.769 kb on - strandat 4984.901 kb on - strandat 4984.920 kb on + strandat 4984.921 kb on - strandat 4984.927 kb on + strandat 4985.117 kb on + strand, within ABZR88_RS20590at 4985.117 kb on + strand, within ABZR88_RS20590at 4985.313 kb on + strand, within ABZR88_RS20590at 4985.407 kb on - strand, within ABZR88_RS20590at 4985.472 kb on - strand, within ABZR88_RS20590at 4985.474 kb on + strand, within ABZR88_RS20590at 4985.475 kb on - strand, within ABZR88_RS20590at 4985.475 kb on - strand, within ABZR88_RS20590at 4985.516 kb on + strand, within ABZR88_RS20590at 4985.558 kb on - strand, within ABZR88_RS20590at 4985.598 kb on + strand, within ABZR88_RS20590at 4985.641 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A 15C; 144 hours
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4,983,238 + ABZR88_RS20580 0.22 -1.0
4,983,239 - ABZR88_RS20580 0.22 -0.2
4,983,293 - ABZR88_RS20580 0.28 +0.2
4,983,328 - ABZR88_RS20580 0.31 -0.1
4,983,362 + ABZR88_RS20580 0.35 -0.2
4,983,409 + ABZR88_RS20580 0.39 -0.6
4,983,498 + ABZR88_RS20580 0.48 -0.3
4,983,525 - ABZR88_RS20580 0.50 +0.6
4,983,701 + ABZR88_RS20580 0.68 +0.1
4,983,702 - ABZR88_RS20580 0.68 -0.1
4,983,826 - ABZR88_RS20580 0.80 -0.4
4,983,847 + ABZR88_RS20580 0.82 -0.3
4,983,911 - ABZR88_RS20580 0.88 +0.6
4,983,934 - +0.3
4,983,995 + -1.1
4,983,996 - -0.8
4,984,125 - +0.4
4,984,241 - ABZR88_RS20585 0.22 -1.1
4,984,388 + ABZR88_RS20585 0.48 -0.8
4,984,531 + ABZR88_RS20585 0.73 -0.4
4,984,684 + -0.1
4,984,685 - -0.2
4,984,769 - +0.6
4,984,901 - -0.9
4,984,920 + -0.8
4,984,921 - -0.0
4,984,927 + +0.2
4,985,117 + ABZR88_RS20590 0.25 +0.7
4,985,117 + ABZR88_RS20590 0.25 +0.1
4,985,313 + ABZR88_RS20590 0.51 -0.4
4,985,407 - ABZR88_RS20590 0.63 +0.7
4,985,472 - ABZR88_RS20590 0.72 -0.9
4,985,474 + ABZR88_RS20590 0.72 +0.9
4,985,475 - ABZR88_RS20590 0.72 -0.2
4,985,475 - ABZR88_RS20590 0.72 +0.2
4,985,516 + ABZR88_RS20590 0.78 +0.4
4,985,558 - ABZR88_RS20590 0.83 -0.6
4,985,598 + ABZR88_RS20590 0.89 +0.3
4,985,641 - -0.3

Or see this region's nucleotide sequence