Experiment: R2A 15C; 72 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS09750 and ABZR88_RS09755 are separated by 22 nucleotides ABZR88_RS09755 and ABZR88_RS09760 are separated by 168 nucleotides ABZR88_RS09760 and ABZR88_RS09765 are separated by 2 nucleotides
ABZR88_RS09750: ABZR88_RS09750 - class 1 fructose-bisphosphatase, at 2,429,067 to 2,430,116
_RS09750
ABZR88_RS09755: ABZR88_RS09755 - metallophosphoesterase, at 2,430,139 to 2,430,630
_RS09755
ABZR88_RS09760: ABZR88_RS09760 - hypothetical protein, at 2,430,799 to 2,431,071
_RS09760
ABZR88_RS09765: ABZR88_RS09765 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 2,431,074 to 2,431,787
_RS09765
Position (kb)
2430
2431 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2429.148 kb on + strand at 2429.153 kb on + strand at 2429.171 kb on + strand at 2429.171 kb on + strand at 2429.171 kb on + strand at 2429.172 kb on - strand, within ABZR88_RS09750 at 2429.330 kb on - strand, within ABZR88_RS09750 at 2429.476 kb on + strand, within ABZR88_RS09750 at 2429.497 kb on + strand, within ABZR88_RS09750 at 2429.597 kb on + strand, within ABZR88_RS09750 at 2429.628 kb on + strand, within ABZR88_RS09750 at 2429.820 kb on - strand, within ABZR88_RS09750 at 2429.821 kb on + strand, within ABZR88_RS09750 at 2429.822 kb on - strand, within ABZR88_RS09750 at 2429.822 kb on - strand, within ABZR88_RS09750 at 2429.908 kb on - strand, within ABZR88_RS09750 at 2430.016 kb on - strand at 2430.351 kb on + strand, within ABZR88_RS09755 at 2430.520 kb on + strand, within ABZR88_RS09755 at 2430.597 kb on + strand at 2430.597 kb on + strand at 2430.807 kb on - strand at 2430.887 kb on - strand, within ABZR88_RS09760 at 2430.930 kb on + strand, within ABZR88_RS09760 at 2430.999 kb on + strand, within ABZR88_RS09760 at 2431.048 kb on - strand at 2431.048 kb on - strand at 2431.112 kb on - strand at 2431.146 kb on - strand, within ABZR88_RS09765 at 2431.146 kb on - strand, within ABZR88_RS09765 at 2431.240 kb on - strand, within ABZR88_RS09765 at 2431.358 kb on + strand, within ABZR88_RS09765 at 2431.436 kb on + strand, within ABZR88_RS09765 at 2431.437 kb on - strand, within ABZR88_RS09765 at 2431.587 kb on + strand, within ABZR88_RS09765
Per-strain Table
Position Strand Gene LocusTag Fraction R2A 15C; 72 hours remove 2,429,148 + -0.3 2,429,153 + -0.0 2,429,171 + +1.1 2,429,171 + -0.1 2,429,171 + +0.0 2,429,172 - ABZR88_RS09750 0.10 -0.3 2,429,330 - ABZR88_RS09750 0.25 +0.3 2,429,476 + ABZR88_RS09750 0.39 -0.1 2,429,497 + ABZR88_RS09750 0.41 +0.3 2,429,597 + ABZR88_RS09750 0.50 +0.3 2,429,628 + ABZR88_RS09750 0.53 +0.3 2,429,820 - ABZR88_RS09750 0.72 +0.2 2,429,821 + ABZR88_RS09750 0.72 +0.1 2,429,822 - ABZR88_RS09750 0.72 -0.5 2,429,822 - ABZR88_RS09750 0.72 -0.0 2,429,908 - ABZR88_RS09750 0.80 -0.4 2,430,016 - +1.1 2,430,351 + ABZR88_RS09755 0.43 +1.7 2,430,520 + ABZR88_RS09755 0.77 +0.0 2,430,597 + -0.1 2,430,597 + -0.1 2,430,807 - -0.3 2,430,887 - ABZR88_RS09760 0.32 -0.3 2,430,930 + ABZR88_RS09760 0.48 +0.0 2,430,999 + ABZR88_RS09760 0.73 -0.0 2,431,048 - +0.9 2,431,048 - +0.1 2,431,112 - -0.2 2,431,146 - ABZR88_RS09765 0.10 +0.1 2,431,146 - ABZR88_RS09765 0.10 -1.5 2,431,240 - ABZR88_RS09765 0.23 -0.1 2,431,358 + ABZR88_RS09765 0.40 -0.2 2,431,436 + ABZR88_RS09765 0.51 -0.1 2,431,437 - ABZR88_RS09765 0.51 +2.8 2,431,587 + ABZR88_RS09765 0.72 +0.0
Or see this region's nucleotide sequence