Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS09755

Experiment: R2A 15C; 72 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS09750 and ABZR88_RS09755 are separated by 22 nucleotidesABZR88_RS09755 and ABZR88_RS09760 are separated by 168 nucleotidesABZR88_RS09760 and ABZR88_RS09765 are separated by 2 nucleotides ABZR88_RS09750: ABZR88_RS09750 - class 1 fructose-bisphosphatase, at 2,429,067 to 2,430,116 _RS09750 ABZR88_RS09755: ABZR88_RS09755 - metallophosphoesterase, at 2,430,139 to 2,430,630 _RS09755 ABZR88_RS09760: ABZR88_RS09760 - hypothetical protein, at 2,430,799 to 2,431,071 _RS09760 ABZR88_RS09765: ABZR88_RS09765 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 2,431,074 to 2,431,787 _RS09765 Position (kb) 2430 2431Strain fitness (log2 ratio) -1 0 1 2 3at 2429.148 kb on + strandat 2429.153 kb on + strandat 2429.171 kb on + strandat 2429.171 kb on + strandat 2429.171 kb on + strandat 2429.172 kb on - strand, within ABZR88_RS09750at 2429.330 kb on - strand, within ABZR88_RS09750at 2429.476 kb on + strand, within ABZR88_RS09750at 2429.497 kb on + strand, within ABZR88_RS09750at 2429.597 kb on + strand, within ABZR88_RS09750at 2429.628 kb on + strand, within ABZR88_RS09750at 2429.820 kb on - strand, within ABZR88_RS09750at 2429.821 kb on + strand, within ABZR88_RS09750at 2429.822 kb on - strand, within ABZR88_RS09750at 2429.822 kb on - strand, within ABZR88_RS09750at 2429.908 kb on - strand, within ABZR88_RS09750at 2430.016 kb on - strandat 2430.351 kb on + strand, within ABZR88_RS09755at 2430.520 kb on + strand, within ABZR88_RS09755at 2430.597 kb on + strandat 2430.597 kb on + strandat 2430.807 kb on - strandat 2430.887 kb on - strand, within ABZR88_RS09760at 2430.930 kb on + strand, within ABZR88_RS09760at 2430.999 kb on + strand, within ABZR88_RS09760at 2431.048 kb on - strandat 2431.048 kb on - strandat 2431.112 kb on - strandat 2431.146 kb on - strand, within ABZR88_RS09765at 2431.146 kb on - strand, within ABZR88_RS09765at 2431.240 kb on - strand, within ABZR88_RS09765at 2431.358 kb on + strand, within ABZR88_RS09765at 2431.436 kb on + strand, within ABZR88_RS09765at 2431.437 kb on - strand, within ABZR88_RS09765at 2431.587 kb on + strand, within ABZR88_RS09765

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A 15C; 72 hours
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2,429,148 + -0.3
2,429,153 + -0.0
2,429,171 + +1.1
2,429,171 + -0.1
2,429,171 + +0.0
2,429,172 - ABZR88_RS09750 0.10 -0.3
2,429,330 - ABZR88_RS09750 0.25 +0.3
2,429,476 + ABZR88_RS09750 0.39 -0.1
2,429,497 + ABZR88_RS09750 0.41 +0.3
2,429,597 + ABZR88_RS09750 0.50 +0.3
2,429,628 + ABZR88_RS09750 0.53 +0.3
2,429,820 - ABZR88_RS09750 0.72 +0.2
2,429,821 + ABZR88_RS09750 0.72 +0.1
2,429,822 - ABZR88_RS09750 0.72 -0.5
2,429,822 - ABZR88_RS09750 0.72 -0.0
2,429,908 - ABZR88_RS09750 0.80 -0.4
2,430,016 - +1.1
2,430,351 + ABZR88_RS09755 0.43 +1.7
2,430,520 + ABZR88_RS09755 0.77 +0.0
2,430,597 + -0.1
2,430,597 + -0.1
2,430,807 - -0.3
2,430,887 - ABZR88_RS09760 0.32 -0.3
2,430,930 + ABZR88_RS09760 0.48 +0.0
2,430,999 + ABZR88_RS09760 0.73 -0.0
2,431,048 - +0.9
2,431,048 - +0.1
2,431,112 - -0.2
2,431,146 - ABZR88_RS09765 0.10 +0.1
2,431,146 - ABZR88_RS09765 0.10 -1.5
2,431,240 - ABZR88_RS09765 0.23 -0.1
2,431,358 + ABZR88_RS09765 0.40 -0.2
2,431,436 + ABZR88_RS09765 0.51 -0.1
2,431,437 - ABZR88_RS09765 0.51 +2.8
2,431,587 + ABZR88_RS09765 0.72 +0.0

Or see this region's nucleotide sequence