Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS08940

Experiment: R2A 15C; 72 hours

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS08935 and ABZR88_RS08940 are separated by 17 nucleotidesABZR88_RS08940 and ABZR88_RS08945 are separated by 1 nucleotides ABZR88_RS08935: ABZR88_RS08935 - O-antigen ligase, at 2,248,083 to 2,249,327 _RS08935 ABZR88_RS08940: ABZR88_RS08940 - sugar transferase, at 2,249,345 to 2,249,941 _RS08940 ABZR88_RS08945: ABZR88_RS08945 - DegT/DnrJ/EryC1/StrS aminotransferase family protein, at 2,249,943 to 2,251,214 _RS08945 Position (kb) 2249 2250Strain fitness (log2 ratio) -2 -1 0 1at 2248.345 kb on + strand, within ABZR88_RS08935at 2248.375 kb on - strand, within ABZR88_RS08935at 2248.412 kb on + strand, within ABZR88_RS08935at 2248.483 kb on - strand, within ABZR88_RS08935at 2248.484 kb on - strand, within ABZR88_RS08935at 2248.582 kb on - strand, within ABZR88_RS08935at 2248.582 kb on - strand, within ABZR88_RS08935at 2248.622 kb on + strand, within ABZR88_RS08935at 2248.623 kb on - strand, within ABZR88_RS08935at 2248.623 kb on - strand, within ABZR88_RS08935at 2248.653 kb on + strand, within ABZR88_RS08935at 2248.654 kb on - strand, within ABZR88_RS08935at 2248.659 kb on - strand, within ABZR88_RS08935at 2248.747 kb on - strand, within ABZR88_RS08935at 2248.794 kb on + strand, within ABZR88_RS08935at 2248.839 kb on - strand, within ABZR88_RS08935at 2248.952 kb on + strand, within ABZR88_RS08935at 2249.140 kb on - strand, within ABZR88_RS08935at 2249.338 kb on - strandat 2249.376 kb on - strandat 2249.468 kb on - strand, within ABZR88_RS08940at 2249.536 kb on + strand, within ABZR88_RS08940at 2249.904 kb on - strandat 2250.042 kb on - strandat 2250.055 kb on + strandat 2250.113 kb on - strand, within ABZR88_RS08945at 2250.139 kb on + strand, within ABZR88_RS08945at 2250.216 kb on - strand, within ABZR88_RS08945at 2250.352 kb on + strand, within ABZR88_RS08945at 2250.570 kb on - strand, within ABZR88_RS08945at 2250.596 kb on + strand, within ABZR88_RS08945at 2250.597 kb on - strand, within ABZR88_RS08945at 2250.651 kb on + strand, within ABZR88_RS08945at 2250.651 kb on + strand, within ABZR88_RS08945at 2250.718 kb on - strand, within ABZR88_RS08945at 2250.794 kb on + strand, within ABZR88_RS08945

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A 15C; 72 hours
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2,248,345 + ABZR88_RS08935 0.21 -1.3
2,248,375 - ABZR88_RS08935 0.23 +0.2
2,248,412 + ABZR88_RS08935 0.26 +0.2
2,248,483 - ABZR88_RS08935 0.32 +1.1
2,248,484 - ABZR88_RS08935 0.32 -0.9
2,248,582 - ABZR88_RS08935 0.40 -0.0
2,248,582 - ABZR88_RS08935 0.40 -0.1
2,248,622 + ABZR88_RS08935 0.43 +0.1
2,248,623 - ABZR88_RS08935 0.43 +0.8
2,248,623 - ABZR88_RS08935 0.43 -0.1
2,248,653 + ABZR88_RS08935 0.46 -0.1
2,248,654 - ABZR88_RS08935 0.46 -0.2
2,248,659 - ABZR88_RS08935 0.46 +0.1
2,248,747 - ABZR88_RS08935 0.53 +0.4
2,248,794 + ABZR88_RS08935 0.57 -0.5
2,248,839 - ABZR88_RS08935 0.61 -0.4
2,248,952 + ABZR88_RS08935 0.70 +0.5
2,249,140 - ABZR88_RS08935 0.85 -0.4
2,249,338 - -0.1
2,249,376 - -0.6
2,249,468 - ABZR88_RS08940 0.21 +0.5
2,249,536 + ABZR88_RS08940 0.32 -0.0
2,249,904 - -1.9
2,250,042 - -0.6
2,250,055 + -0.1
2,250,113 - ABZR88_RS08945 0.13 +0.2
2,250,139 + ABZR88_RS08945 0.15 +0.3
2,250,216 - ABZR88_RS08945 0.21 -0.1
2,250,352 + ABZR88_RS08945 0.32 +0.8
2,250,570 - ABZR88_RS08945 0.49 -0.1
2,250,596 + ABZR88_RS08945 0.51 +0.3
2,250,597 - ABZR88_RS08945 0.51 +0.1
2,250,651 + ABZR88_RS08945 0.56 +0.0
2,250,651 + ABZR88_RS08945 0.56 -0.2
2,250,718 - ABZR88_RS08945 0.61 +0.4
2,250,794 + ABZR88_RS08945 0.67 -0.2

Or see this region's nucleotide sequence