Experiment: R2A 15C; 72 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS03525 and ABZR88_RS03530 are separated by 74 nucleotides ABZR88_RS03530 and ABZR88_RS03535 are separated by 177 nucleotides
ABZR88_RS03525: ABZR88_RS03525 - cupin-like domain-containing protein, at 843,483 to 844,364
_RS03525
ABZR88_RS03530: ABZR88_RS03530 - cupin-like domain-containing protein, at 844,439 to 845,341
_RS03530
ABZR88_RS03535: ABZR88_RS03535 - threonine synthase, at 845,519 to 846,601
_RS03535
Position (kb) 844
845
846 Strain fitness (log2 ratio) -2
-1
0
1
2 at 843.475 kb on + strand at 843.601 kb on - strand, within ABZR88_RS03525 at 843.613 kb on + strand, within ABZR88_RS03525 at 843.686 kb on - strand, within ABZR88_RS03525 at 843.935 kb on - strand, within ABZR88_RS03525 at 843.935 kb on - strand, within ABZR88_RS03525 at 843.948 kb on - strand, within ABZR88_RS03525 at 843.993 kb on - strand, within ABZR88_RS03525 at 844.078 kb on - strand, within ABZR88_RS03525 at 844.146 kb on - strand, within ABZR88_RS03525 at 844.219 kb on + strand, within ABZR88_RS03525 at 844.389 kb on + strand at 844.570 kb on + strand, within ABZR88_RS03530 at 844.571 kb on - strand, within ABZR88_RS03530 at 844.716 kb on - strand, within ABZR88_RS03530 at 844.785 kb on + strand, within ABZR88_RS03530 at 844.822 kb on - strand, within ABZR88_RS03530 at 844.843 kb on - strand, within ABZR88_RS03530 at 844.855 kb on + strand, within ABZR88_RS03530 at 844.856 kb on - strand, within ABZR88_RS03530 at 844.951 kb on + strand, within ABZR88_RS03530 at 845.184 kb on - strand, within ABZR88_RS03530 at 845.274 kb on + strand at 845.372 kb on + strand at 845.539 kb on - strand at 845.542 kb on + strand at 845.562 kb on - strand at 845.656 kb on + strand, within ABZR88_RS03535 at 845.708 kb on + strand, within ABZR88_RS03535 at 845.708 kb on + strand, within ABZR88_RS03535 at 845.750 kb on + strand, within ABZR88_RS03535 at 845.751 kb on - strand, within ABZR88_RS03535 at 845.759 kb on - strand, within ABZR88_RS03535 at 845.800 kb on + strand, within ABZR88_RS03535 at 845.800 kb on + strand, within ABZR88_RS03535 at 845.801 kb on - strand, within ABZR88_RS03535 at 845.955 kb on - strand, within ABZR88_RS03535 at 845.990 kb on + strand, within ABZR88_RS03535 at 846.159 kb on - strand, within ABZR88_RS03535 at 846.302 kb on - strand, within ABZR88_RS03535 at 846.325 kb on + strand, within ABZR88_RS03535
Per-strain Table
Position Strand Gene LocusTag Fraction R2A 15C; 72 hours remove 843,475 + -0.3 843,601 - ABZR88_RS03525 0.13 -0.4 843,613 + ABZR88_RS03525 0.15 -1.7 843,686 - ABZR88_RS03525 0.23 -0.2 843,935 - ABZR88_RS03525 0.51 +0.8 843,935 - ABZR88_RS03525 0.51 -0.2 843,948 - ABZR88_RS03525 0.53 -0.3 843,993 - ABZR88_RS03525 0.58 +2.6 844,078 - ABZR88_RS03525 0.67 -0.5 844,146 - ABZR88_RS03525 0.75 -0.0 844,219 + ABZR88_RS03525 0.83 -0.3 844,389 + -0.5 844,570 + ABZR88_RS03530 0.15 -0.5 844,571 - ABZR88_RS03530 0.15 -0.6 844,716 - ABZR88_RS03530 0.31 -0.5 844,785 + ABZR88_RS03530 0.38 -0.9 844,822 - ABZR88_RS03530 0.42 -1.4 844,843 - ABZR88_RS03530 0.45 -0.3 844,855 + ABZR88_RS03530 0.46 -0.9 844,856 - ABZR88_RS03530 0.46 -2.3 844,951 + ABZR88_RS03530 0.57 +0.9 845,184 - ABZR88_RS03530 0.83 -2.7 845,274 + -0.5 845,372 + -0.7 845,539 - +1.4 845,542 + +0.1 845,562 - +0.4 845,656 + ABZR88_RS03535 0.13 +0.1 845,708 + ABZR88_RS03535 0.17 +0.2 845,708 + ABZR88_RS03535 0.17 +0.0 845,750 + ABZR88_RS03535 0.21 +0.4 845,751 - ABZR88_RS03535 0.21 +1.8 845,759 - ABZR88_RS03535 0.22 +1.5 845,800 + ABZR88_RS03535 0.26 -0.0 845,800 + ABZR88_RS03535 0.26 +1.0 845,801 - ABZR88_RS03535 0.26 +1.9 845,955 - ABZR88_RS03535 0.40 +1.0 845,990 + ABZR88_RS03535 0.43 -1.5 846,159 - ABZR88_RS03535 0.59 +1.0 846,302 - ABZR88_RS03535 0.72 +0.8 846,325 + ABZR88_RS03535 0.74 +0.8
Or see this region's nucleotide sequence