Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17075

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
2,161,438	+	yhbS	HEPCGN_17060	0.85	-0.6
2,161,603	-	yhbQ	HEPCGN_17065	0.34	+0.8
2,161,754	+	yhbQ	HEPCGN_17065	0.83	-2.0
2,161,754	+	yhbQ	HEPCGN_17065	0.83	+0.2
2,161,755	-	yhbQ	HEPCGN_17065	0.84	-0.6
2,161,755	-	yhbQ	HEPCGN_17065	0.84	-0.9
2,161,821	-				+0.6
2,161,821	-				+0.5
2,161,837	+				-0.7
2,161,838	-				+1.0
2,161,839	+				+0.8
2,161,840	-				+0.9
2,161,944	-	yhbP	HEPCGN_17070	0.20	+0.8
2,162,100	-	yhbP	HEPCGN_17070	0.55	+0.4
2,162,154	+	yhbP	HEPCGN_17070	0.68	-0.9
2,162,154	+	yhbP	HEPCGN_17070	0.68	+0.2
2,162,270	-				-1.5
2,162,411	+	yhbO	HEPCGN_17075	0.26	+0.4
2,162,676	-	yhbO	HEPCGN_17075	0.77	+1.3
2,162,847	+				-0.7
2,162,851	+				+0.7
2,162,852	-				-0.7
2,162,863	+				-0.1
2,162,911	-				+2.1
2,162,940	+				+0.8
2,163,011	+	yraR	HEPCGN_17080	0.14	+1.0
2,163,042	+	yraR	HEPCGN_17080	0.19	-0.6
2,163,043	-	yraR	HEPCGN_17080	0.19	+0.6
2,163,043	-	yraR	HEPCGN_17080	0.19	-0.7
2,163,159	+	yraR	HEPCGN_17080	0.37	-1.2
2,163,171	+	yraR	HEPCGN_17080	0.39	+0.0
2,163,184	+	yraR	HEPCGN_17080	0.41	-0.4
2,163,184	+	yraR	HEPCGN_17080	0.41	+0.5
2,163,237	+	yraR	HEPCGN_17080	0.49	+0.7
2,163,237	+	yraR	HEPCGN_17080	0.49	+0.2
2,163,237	+	yraR	HEPCGN_17080	0.49	+0.1
2,163,238	-	yraR	HEPCGN_17080	0.50	-0.5
2,163,264	+	yraR	HEPCGN_17080	0.54	-0.3
2,163,286	+	yraR	HEPCGN_17080	0.57	-0.9
2,163,286	+	yraR	HEPCGN_17080	0.57	-0.8
2,163,286	+	yraR	HEPCGN_17080	0.57	+0.5
2,163,382	-	yraR	HEPCGN_17080	0.72	-2.6
2,163,557	-				-1.2
2,163,604	+				-0.1
2,163,604	+				+0.5
2,163,604	+				+0.8
2,163,605	-				-0.9
2,163,610	-				-1.5
2,163,614	+				-1.2
2,163,614	+				+0.7
2,163,615	-				+0.7
2,163,615	-				+1.9
2,163,630	+				+0.3
2,163,631	-				+0.8
2,163,721	+				+0.2
2,163,721	+				+1.6
2,163,721	+				-0.9
2,163,722	-				+0.8
2,163,722	-				+2.0
2,163,739	+	yraQ	HEPCGN_17085	0.10	+0.9
2,163,740	-	yraQ	HEPCGN_17085	0.10	-1.0
2,163,740	-	yraQ	HEPCGN_17085	0.10	+1.0
2,163,742	+	yraQ	HEPCGN_17085	0.11	-0.6
2,163,783	+	yraQ	HEPCGN_17085	0.15	+0.1
2,163,784	-	yraQ	HEPCGN_17085	0.15	+0.4
2,163,789	+	yraQ	HEPCGN_17085	0.15	+0.4
2,163,790	-	yraQ	HEPCGN_17085	0.15	-0.0