Strain Fitness in Escherichia coli ECOR38 around HEPCGN_16740

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
2,097,861	-				-1.3
2,097,964	-				+0.1
2,097,994	+				-0.6
2,097,994	+				-0.9
2,097,994	+				-0.9
2,097,994	+				-0.4
2,097,994	+				-1.9
2,097,995	-				-1.0
2,097,995	-				-0.5
2,097,995	-				-0.2
2,098,002	+				-0.3
2,098,003	-				+2.2
2,098,003	-				+0.9
2,098,009	-				+0.2
2,098,201	+	nanE	HEPCGN_16735	0.30	+0.8
2,098,253	+	nanE	HEPCGN_16735	0.37	+0.2
2,098,253	+	nanE	HEPCGN_16735	0.37	-0.4
2,098,253	+	nanE	HEPCGN_16735	0.37	-0.0
2,098,253	+	nanE	HEPCGN_16735	0.37	+0.2
2,098,254	-	nanE	HEPCGN_16735	0.38	-0.6
2,098,254	-	nanE	HEPCGN_16735	0.38	+1.8
2,098,254	-	nanE	HEPCGN_16735	0.38	-0.7
2,098,254	-	nanE	HEPCGN_16735	0.38	-1.4
2,098,375	-	nanE	HEPCGN_16735	0.55	+0.6
2,098,465	+	nanE	HEPCGN_16735	0.68	+0.7
2,098,554	-	nanE	HEPCGN_16735	0.81	-0.5
2,098,680	+				+0.3
2,098,680	+				-0.9
2,098,680	+				-1.7
2,098,823	+	nanK	HEPCGN_16740	0.16	+0.3
2,098,824	-	nanK	HEPCGN_16740	0.16	+0.9
2,098,895	+	nanK	HEPCGN_16740	0.24	+0.3
2,098,896	-	nanK	HEPCGN_16740	0.25	+0.5
2,098,929	-	nanK	HEPCGN_16740	0.28	+2.5
2,098,929	-	nanK	HEPCGN_16740	0.28	+0.5
2,098,932	-	nanK	HEPCGN_16740	0.29	+1.4
2,098,947	+	nanK	HEPCGN_16740	0.30	+0.2
2,099,042	+	nanK	HEPCGN_16740	0.41	+2.2
2,099,058	+	nanK	HEPCGN_16740	0.43	+0.5
2,099,059	-	nanK	HEPCGN_16740	0.43	+0.1
2,099,091	-	nanK	HEPCGN_16740	0.47	-2.4
2,099,091	-	nanK	HEPCGN_16740	0.47	+0.4
2,099,113	-	nanK	HEPCGN_16740	0.49	+0.7
2,099,149	-	nanK	HEPCGN_16740	0.53	-0.1
2,099,275	-	nanK	HEPCGN_16740	0.68	+1.1
2,099,337	+	nanK	HEPCGN_16740	0.75	+1.2
2,099,361	+	nanK	HEPCGN_16740	0.78	-2.1
2,099,362	-	nanK	HEPCGN_16740	0.78	+2.3
2,099,365	-	nanK	HEPCGN_16740	0.78	-2.7
2,099,606	-	nanQ	HEPCGN_16745	0.11	+0.3
2,099,684	+	nanQ	HEPCGN_16745	0.28	+0.3
2,099,685	-	nanQ	HEPCGN_16745	0.28	-0.8
2,099,685	-	nanQ	HEPCGN_16745	0.28	-0.7
2,099,685	-	nanQ	HEPCGN_16745	0.28	+0.2
2,099,709	-	nanQ	HEPCGN_16745	0.34	+0.3
2,099,754	+	nanQ	HEPCGN_16745	0.43	-0.6
2,099,755	-	nanQ	HEPCGN_16745	0.43	-0.4
2,099,762	+	nanQ	HEPCGN_16745	0.45	+1.9
2,099,762	+	nanQ	HEPCGN_16745	0.45	-0.1
2,099,773	+	nanQ	HEPCGN_16745	0.47	-1.4
2,099,773	+	nanQ	HEPCGN_16745	0.47	-0.3
2,099,853	+	nanQ	HEPCGN_16745	0.65	+0.4
2,099,854	-	nanQ	HEPCGN_16745	0.65	-1.1
2,099,921	+	nanQ	HEPCGN_16745	0.79	-0.1
2,100,088	+				-1.8
2,100,101	+				+1.0
2,100,152	+				+0.4
2,100,152	+				+0.1
2,100,163	+				-0.1
2,100,163	+				+1.0
2,100,164	-				+0.5
2,100,164	-				+0.3
2,100,166	-				-1.4
2,100,166	-				+0.7
2,100,187	+				+1.0
2,100,187	+				-0.5
2,100,294	+		HEPCGN_16750	0.19	-0.3
2,100,304	-		HEPCGN_16750	0.20	+0.9
2,100,304	-		HEPCGN_16750	0.20	+0.4
2,100,307	+		HEPCGN_16750	0.21	+0.8
2,100,307	+		HEPCGN_16750	0.21	-0.1
2,100,307	+		HEPCGN_16750	0.21	-1.6
2,100,307	+		HEPCGN_16750	0.21	-0.7
2,100,308	-		HEPCGN_16750	0.21	+0.9
2,100,308	-		HEPCGN_16750	0.21	+0.1
2,100,308	-		HEPCGN_16750	0.21	-0.2
2,100,308	-		HEPCGN_16750	0.21	-0.9
2,100,329	-		HEPCGN_16750	0.23	-0.5
2,100,330	+		HEPCGN_16750	0.23	-0.4
2,100,331	-		HEPCGN_16750	0.23	-0.3
2,100,350	+		HEPCGN_16750	0.25	+0.3
2,100,374	+		HEPCGN_16750	0.27	+0.7
2,100,446	-		HEPCGN_16750	0.33	-2.8