Experiment: Bas21
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsY and ftsE are separated by 2 nucleotides ftsE and ftsX overlap by 8 nucleotides
HEPCGN_15530: ftsY - signal recognition particle-docking protein FtsY, at 1,867,817 to 1,869,304
ftsY
HEPCGN_15535: ftsE - cell division ATP-binding protein FtsE, at 1,869,307 to 1,869,975
ftsE
HEPCGN_15540: ftsX - permease-like cell division protein FtsX, at 1,869,968 to 1,871,026
ftsX
Position (kb) 1869
1870 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 1869.337 kb on + strand at 1869.338 kb on - strand at 1869.369 kb on + strand at 1869.378 kb on + strand, within ftsE at 1869.433 kb on - strand, within ftsE at 1869.433 kb on - strand, within ftsE at 1869.588 kb on + strand, within ftsE at 1869.589 kb on - strand, within ftsE at 1869.686 kb on + strand, within ftsE at 1869.836 kb on + strand, within ftsE at 1869.974 kb on - strand at 1870.064 kb on - strand at 1870.139 kb on + strand, within ftsX at 1870.139 kb on + strand, within ftsX at 1870.140 kb on - strand, within ftsX at 1870.241 kb on + strand, within ftsX at 1870.241 kb on + strand, within ftsX at 1870.241 kb on + strand, within ftsX at 1870.241 kb on + strand, within ftsX at 1870.242 kb on - strand, within ftsX at 1870.242 kb on - strand, within ftsX at 1870.242 kb on - strand, within ftsX at 1870.243 kb on + strand, within ftsX at 1870.243 kb on + strand, within ftsX at 1870.243 kb on + strand, within ftsX at 1870.243 kb on + strand, within ftsX at 1870.244 kb on - strand, within ftsX at 1870.244 kb on - strand, within ftsX at 1870.251 kb on - strand, within ftsX at 1870.261 kb on + strand, within ftsX at 1870.280 kb on + strand, within ftsX at 1870.281 kb on - strand, within ftsX at 1870.284 kb on - strand, within ftsX at 1870.307 kb on + strand, within ftsX at 1870.392 kb on - strand, within ftsX at 1870.456 kb on + strand, within ftsX at 1870.534 kb on + strand, within ftsX at 1870.535 kb on - strand, within ftsX at 1870.708 kb on + strand, within ftsX at 1870.787 kb on + strand, within ftsX at 1870.953 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas21 remove 1,869,337 + +1.0 1,869,338 - -1.0 1,869,369 + +1.9 1,869,378 + ftsE HEPCGN_15535 0.11 +0.6 1,869,433 - ftsE HEPCGN_15535 0.19 -0.1 1,869,433 - ftsE HEPCGN_15535 0.19 +4.5 1,869,588 + ftsE HEPCGN_15535 0.42 +0.3 1,869,589 - ftsE HEPCGN_15535 0.42 +3.5 1,869,686 + ftsE HEPCGN_15535 0.57 +0.1 1,869,836 + ftsE HEPCGN_15535 0.79 +0.9 1,869,974 - -0.5 1,870,064 - -0.0 1,870,139 + ftsX HEPCGN_15540 0.16 +1.0 1,870,139 + ftsX HEPCGN_15540 0.16 -0.1 1,870,140 - ftsX HEPCGN_15540 0.16 -1.3 1,870,241 + ftsX HEPCGN_15540 0.26 +1.5 1,870,241 + ftsX HEPCGN_15540 0.26 +0.3 1,870,241 + ftsX HEPCGN_15540 0.26 -0.2 1,870,241 + ftsX HEPCGN_15540 0.26 -1.5 1,870,242 - ftsX HEPCGN_15540 0.26 +4.6 1,870,242 - ftsX HEPCGN_15540 0.26 +3.7 1,870,242 - ftsX HEPCGN_15540 0.26 +1.0 1,870,243 + ftsX HEPCGN_15540 0.26 +0.4 1,870,243 + ftsX HEPCGN_15540 0.26 +3.6 1,870,243 + ftsX HEPCGN_15540 0.26 -1.0 1,870,243 + ftsX HEPCGN_15540 0.26 +1.6 1,870,244 - ftsX HEPCGN_15540 0.26 +0.0 1,870,244 - ftsX HEPCGN_15540 0.26 +1.1 1,870,251 - ftsX HEPCGN_15540 0.27 +2.6 1,870,261 + ftsX HEPCGN_15540 0.28 +0.4 1,870,280 + ftsX HEPCGN_15540 0.29 -0.0 1,870,281 - ftsX HEPCGN_15540 0.30 +0.1 1,870,284 - ftsX HEPCGN_15540 0.30 +1.1 1,870,307 + ftsX HEPCGN_15540 0.32 +1.5 1,870,392 - ftsX HEPCGN_15540 0.40 -0.4 1,870,456 + ftsX HEPCGN_15540 0.46 +0.4 1,870,534 + ftsX HEPCGN_15540 0.53 +1.4 1,870,535 - ftsX HEPCGN_15540 0.54 +0.2 1,870,708 + ftsX HEPCGN_15540 0.70 -0.1 1,870,787 + ftsX HEPCGN_15540 0.77 +2.7 1,870,953 + -0.0
Or see this region's nucleotide sequence