Strain Fitness in Escherichia coli ECOR38 around HEPCGN_06830

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
101,978	-				+0.2
102,023	+				-0.4
102,029	-				+1.3
102,029	-				-1.7
102,087	-				-0.5
102,097	-				-1.2
102,123	-				+0.6
102,127	-				-1.5
102,133	+				-0.5
102,137	-				-1.1
102,141	-				+1.0
102,226	-				+0.9
102,250	+				+0.7
102,254	-				+1.6
102,254	-				+2.5
102,338	+				-0.5
102,339	-				+1.8
102,422	+				+0.4
102,424	+				+0.8
102,424	+				+0.0
102,428	+				-1.4
102,428	+				-0.3
102,429	-				-1.4
102,429	-				-0.4
102,433	+				-0.6
102,531	-				+1.0
102,701	-	tomB	HEPCGN_06825	0.48	+0.0
102,704	+	tomB	HEPCGN_06825	0.49	-0.7
102,717	-	tomB	HEPCGN_06825	0.52	-2.2
102,719	-	tomB	HEPCGN_06825	0.53	+0.8
102,772	+	tomB	HEPCGN_06825	0.67	-0.2
102,788	+	tomB	HEPCGN_06825	0.71	+0.3
102,788	+	tomB	HEPCGN_06825	0.71	-0.7
102,789	-	tomB	HEPCGN_06825	0.71	+1.0
102,794	-	tomB	HEPCGN_06825	0.73	+0.9
102,796	+	tomB	HEPCGN_06825	0.73	+0.1
102,797	-	tomB	HEPCGN_06825	0.74	-0.6
102,833	-	tomB	HEPCGN_06825	0.83	+1.2
102,914	+				+0.3
102,920	+				-0.3
103,024	+	tomB	HEPCGN_06830	0.47	+1.9
103,086	-	tomB	HEPCGN_06830	0.75	-1.2
103,091	+	tomB	HEPCGN_06830	0.78	+0.1
103,091	+	tomB	HEPCGN_06830	0.78	+0.5
103,099	-	tomB	HEPCGN_06830	0.81	+1.3
103,141	-				-1.2
103,216	-				+0.7
103,239	+				+1.9
103,350	+				+0.1
103,372	+	maa	HEPCGN_06835	0.11	+0.7
103,491	+	maa	HEPCGN_06835	0.33	-1.7
103,492	-	maa	HEPCGN_06835	0.33	-0.4
103,492	-	maa	HEPCGN_06835	0.33	-0.1
103,493	+	maa	HEPCGN_06835	0.33	-1.1
103,493	+	maa	HEPCGN_06835	0.33	-0.3
103,494	-	maa	HEPCGN_06835	0.33	+0.3
103,524	+	maa	HEPCGN_06835	0.39	-1.7
103,526	+	maa	HEPCGN_06835	0.39	-2.2
103,605	-	maa	HEPCGN_06835	0.53	-0.3
103,605	-	maa	HEPCGN_06835	0.53	-0.1
103,610	+	maa	HEPCGN_06835	0.54	-1.0
103,611	-	maa	HEPCGN_06835	0.54	+1.0
103,635	+	maa	HEPCGN_06835	0.59	-0.0
103,664	-	maa	HEPCGN_06835	0.64	+0.8
103,919	+				+0.1
103,919	+				+0.8
103,920	-				-2.0
103,930	+				-0.9
103,961	+				+0.6
104,058	+	ylaC	HEPCGN_06840	0.17	+0.0
104,104	+	ylaC	HEPCGN_06840	0.27	-0.1
104,105	-	ylaC	HEPCGN_06840	0.27	+0.1
104,105	-	ylaC	HEPCGN_06840	0.27	-0.0
104,105	-	ylaC	HEPCGN_06840	0.27	-0.7
104,105	-	ylaC	HEPCGN_06840	0.27	+1.7