Strain Fitness in Escherichia coli ECOR38 around HEPCGN_05480

Experiment: Bas21

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas21
967,480	-	btuE	HEPCGN_05470	0.75	+0.5
967,480	-	btuE	HEPCGN_05470	0.75	-0.3
967,614	+				+1.6
967,621	+				-0.2
967,741	-	btuD	HEPCGN_05475	0.17	-1.7
968,079	+	btuD	HEPCGN_05475	0.62	+3.6
968,200	+	btuD	HEPCGN_05475	0.78	-1.2
968,200	+	btuD	HEPCGN_05475	0.78	+0.2
968,201	-	btuD	HEPCGN_05475	0.78	+1.9
968,372	+				+1.8
968,373	-				-0.0
968,721	+	nlpC	HEPCGN_05480	0.60	-1.7
968,790	-	nlpC	HEPCGN_05480	0.75	-0.2
968,798	-	nlpC	HEPCGN_05480	0.76	+0.2
968,909	-				-0.6
968,950	-				-0.3
968,960	-				+1.6
968,968	-				-0.2
969,026	-				-1.1
969,026	-				+0.5
969,089	-				-2.1
969,213	+				+0.9
969,242	+	ydiV	HEPCGN_05485	0.12	+0.5
969,246	+	ydiV	HEPCGN_05485	0.13	-0.2
969,300	-	ydiV	HEPCGN_05485	0.20	+0.7
969,448	-	ydiV	HEPCGN_05485	0.41	+0.7
969,907	+				+2.0