Experiment: Bas21
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeeA and yoeJ are separated by 55 nucleotides yoeJ and yeeX are separated by 65 nucleotides
HEPCGN_03295: yeeA - Inner membrane protein YeeA, at 568,943 to 570,001
yeeA
HEPCGN_03300: yoeJ - Protein YoeJ, at 570,057 to 570,107
yoeJ
HEPCGN_03305: yeeX - DUF496 domain-containing protein, at 570,173 to 570,502
yeeX
Position (kb) 570
571 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 569.062 kb on + strand, within yeeA at 569.063 kb on - strand, within yeeA at 569.215 kb on - strand, within yeeA at 569.416 kb on + strand, within yeeA at 569.416 kb on + strand, within yeeA at 569.422 kb on + strand, within yeeA at 569.633 kb on + strand, within yeeA at 569.633 kb on + strand, within yeeA at 569.633 kb on + strand, within yeeA at 569.753 kb on - strand, within yeeA at 569.810 kb on - strand, within yeeA at 569.918 kb on + strand at 569.918 kb on + strand at 569.918 kb on + strand at 569.918 kb on + strand at 569.918 kb on + strand at 569.919 kb on - strand at 569.919 kb on - strand at 569.924 kb on + strand at 569.924 kb on + strand at 569.925 kb on - strand at 570.056 kb on + strand at 570.099 kb on + strand, within yoeJ at 570.100 kb on - strand, within yoeJ at 570.157 kb on + strand at 570.181 kb on + strand at 570.181 kb on + strand at 570.181 kb on + strand at 570.182 kb on - strand at 570.182 kb on - strand at 570.205 kb on - strand at 570.232 kb on + strand, within yeeX at 570.233 kb on - strand, within yeeX at 570.324 kb on - strand, within yeeX at 570.387 kb on - strand, within yeeX at 570.407 kb on + strand, within yeeX at 570.469 kb on + strand, within yeeX at 570.469 kb on + strand, within yeeX at 570.501 kb on - strand at 570.513 kb on - strand at 570.623 kb on + strand at 570.660 kb on - strand at 570.660 kb on - strand at 570.660 kb on - strand at 570.660 kb on - strand at 570.679 kb on - strand at 570.726 kb on + strand at 570.726 kb on + strand at 570.763 kb on - strand at 570.915 kb on + strand at 570.916 kb on - strand at 570.967 kb on - strand at 570.979 kb on + strand at 571.014 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas21 remove 569,062 + yeeA HEPCGN_03295 0.11 +0.4 569,063 - yeeA HEPCGN_03295 0.11 +1.3 569,215 - yeeA HEPCGN_03295 0.26 +0.2 569,416 + yeeA HEPCGN_03295 0.45 -0.4 569,416 + yeeA HEPCGN_03295 0.45 -0.2 569,422 + yeeA HEPCGN_03295 0.45 -0.3 569,633 + yeeA HEPCGN_03295 0.65 +0.7 569,633 + yeeA HEPCGN_03295 0.65 -0.3 569,633 + yeeA HEPCGN_03295 0.65 +2.8 569,753 - yeeA HEPCGN_03295 0.76 -0.3 569,810 - yeeA HEPCGN_03295 0.82 -0.1 569,918 + +0.5 569,918 + +2.8 569,918 + +0.3 569,918 + -0.0 569,918 + +0.2 569,919 - +0.5 569,919 - -0.9 569,924 + +0.4 569,924 + +0.2 569,925 - -0.3 570,056 + +0.1 570,099 + yoeJ HEPCGN_03300 0.82 -1.8 570,100 - yoeJ HEPCGN_03300 0.84 -1.5 570,157 + -1.0 570,181 + -0.6 570,181 + +0.5 570,181 + -0.1 570,182 - +1.2 570,182 - +1.0 570,205 - -0.5 570,232 + yeeX HEPCGN_03305 0.18 +0.1 570,233 - yeeX HEPCGN_03305 0.18 -0.1 570,324 - yeeX HEPCGN_03305 0.46 -0.6 570,387 - yeeX HEPCGN_03305 0.65 -3.0 570,407 + yeeX HEPCGN_03305 0.71 +0.0 570,469 + yeeX HEPCGN_03305 0.90 -0.6 570,469 + yeeX HEPCGN_03305 0.90 +0.2 570,501 - -0.6 570,513 - -1.1 570,623 + +0.3 570,660 - -0.2 570,660 - +0.2 570,660 - -0.6 570,660 - +0.8 570,679 - +0.7 570,726 + +0.0 570,726 + -1.3 570,763 - -0.1 570,915 + -0.7 570,916 - +0.2 570,967 - +0.0 570,979 + +0.1 571,014 - +2.7
Or see this region's nucleotide sequence