Strain Fitness in Escherichia coli ECOR38 around HEPCGN_26545

Experiment: CEV1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	CEV1
4,064,271	-	ydeN	HEPCGN_26540	0.68	+1.2
4,064,287	+	ydeN	HEPCGN_26540	0.69	-3.4
4,064,288	-	ydeN	HEPCGN_26540	0.69	-1.5
4,064,440	+	ydeN	HEPCGN_26540	0.78	+0.3
4,064,519	+	ydeN	HEPCGN_26540	0.82	+1.3
4,064,524	-	ydeN	HEPCGN_26540	0.83	+0.1
4,064,537	-	ydeN	HEPCGN_26540	0.83	+1.5
4,064,766	+				-0.7
4,064,787	+				+1.7
4,064,787	+				+1.7
4,064,838	-				+0.7
4,064,933	+				+1.2
4,064,972	+				+0.6
4,065,124	+				+0.3
4,065,225	-				+0.4
4,065,331	+	ydeO	HEPCGN_26545	0.15	+1.2
4,065,335	+	ydeO	HEPCGN_26545	0.15	-1.7
4,065,882	+	ydeO	HEPCGN_26545	0.87	-1.0
4,066,121	-	safA	HEPCGN_26550	0.33	+0.1
4,066,206	+	safA	HEPCGN_26550	0.76	+0.2
4,066,401	-				+2.3
4,066,529	+				+0.7
4,066,536	-				+1.2
4,066,578	+				-2.0
4,066,578	+				+0.1
4,066,746	-	ydeP	HEPCGN_26555	0.11	+1.7
4,066,808	-	ydeP	HEPCGN_26555	0.14	-1.5
4,066,888	-	ydeP	HEPCGN_26555	0.17	+1.9
4,066,904	+	ydeP	HEPCGN_26555	0.18	+1.2
4,066,913	+	ydeP	HEPCGN_26555	0.18	+0.1