Strain Fitness in Escherichia coli ECOR38 around HEPCGN_26445

Experiment: CEV1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	CEV1
4,037,384	-	maeA	HEPCGN_26435	0.67	-0.0
4,037,426	+	maeA	HEPCGN_26435	0.69	+1.0
4,037,507	+	maeA	HEPCGN_26435	0.74	-0.0
4,037,507	+	maeA	HEPCGN_26435	0.74	+2.7
4,037,508	-	maeA	HEPCGN_26435	0.74	+1.4
4,037,508	-	maeA	HEPCGN_26435	0.74	+0.5
4,037,514	-	maeA	HEPCGN_26435	0.74	-2.2
4,037,524	-	maeA	HEPCGN_26435	0.75	+0.0
4,037,546	+	maeA	HEPCGN_26435	0.76	-2.2
4,037,571	-	maeA	HEPCGN_26435	0.78	+0.3
4,037,574	+	maeA	HEPCGN_26435	0.78	+0.2
4,037,575	-	maeA	HEPCGN_26435	0.78	+2.0
4,037,594	-	maeA	HEPCGN_26435	0.79	+0.7
4,037,639	-	maeA	HEPCGN_26435	0.82	+2.2
4,037,683	+	maeA	HEPCGN_26435	0.84	+2.4
4,037,723	-	maeA	HEPCGN_26435	0.87	-0.0
4,037,893	-				+0.5
4,037,913	-				+1.2
4,037,914	+				+0.4
4,037,915	-				+1.3
4,037,915	-				-1.1
4,037,915	-				+1.6
4,038,029	-				-1.6
4,038,144	+	sra	HEPCGN_26440	0.28	+0.3
4,038,216	-	sra	HEPCGN_26440	0.80	+1.3
4,038,245	+				-0.7
4,038,320	-				-0.4
4,038,337	+				-0.4
4,038,338	-				-0.8
4,038,338	-				-0.2
4,038,338	-				-1.0
4,038,338	-				+1.0
4,038,376	-	bdm	HEPCGN_26445	0.15	-0.2
4,038,397	+	bdm	HEPCGN_26445	0.25	-1.1
4,038,553	+				-0.4
4,038,554	-				+0.4
4,038,775	+				+0.3
4,039,011	+	osmC	HEPCGN_26450	0.25	+1.0
4,039,011	+	osmC	HEPCGN_26450	0.25	+0.5
4,039,254	+	osmC	HEPCGN_26450	0.81	-0.7
4,039,537	+	ddpF	HEPCGN_26455	0.16	-1.3
4,039,537	+	ddpF	HEPCGN_26455	0.16	+1.0
4,039,541	+	ddpF	HEPCGN_26455	0.16	-0.1