Strain Fitness in Escherichia coli ECOR38 around HEPCGN_26380
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
4,023,531 | - | narU | HEPCGN_26375 | 0.53 | -0.5 |
4,023,617 | + | narU | HEPCGN_26375 | 0.59 | +0.8 |
4,023,663 | - | narU | HEPCGN_26375 | 0.62 | -1.6 |
4,023,689 | - | narU | HEPCGN_26375 | 0.64 | +0.1 |
4,023,780 | - | narU | HEPCGN_26375 | 0.70 | +2.1 |
4,023,814 | + | narU | HEPCGN_26375 | 0.73 | +0.2 |
4,023,902 | + | narU | HEPCGN_26375 | 0.79 | +1.0 |
4,023,902 | + | narU | HEPCGN_26375 | 0.79 | -1.3 |
4,024,022 | - | narU | HEPCGN_26375 | 0.88 | +0.3 |
4,024,353 | + | -0.1 | |||
4,024,401 | - | -0.6 | |||
4,024,589 | - | -0.7 | |||
4,025,287 | + | espR1 | HEPCGN_26380 | 0.63 | +1.6 |
4,025,901 | + | -0.2 | |||
4,025,935 | + | +0.1 | |||
4,026,012 | + | HEPCGN_26385 | 0.15 | -0.4 | |
4,026,380 | + | HEPCGN_26385 | 0.45 | +1.8 | |
4,026,472 | - | HEPCGN_26385 | 0.52 | +1.4 |
Or see this region's nucleotide sequence