Strain Fitness in Escherichia coli ECOR38 around HEPCGN_26340

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
4,012,554	+		HEPCGN_26330	0.37	-0.5
4,012,683	-		HEPCGN_26330	0.63	-0.8
4,012,815	+				-0.5
4,012,838	+				-1.1
4,012,862	+				-0.5
4,012,932	+				+0.1
4,013,002	+				+0.6
4,013,002	+				-0.3
4,013,048	+				+1.0
4,013,051	+				-0.7
4,013,110	+				-2.2
4,013,110	+				+0.0
4,013,111	-				+0.7
4,013,111	-				-1.3
4,013,182	-				-0.1
4,013,326	-	pptA	HEPCGN_26335	0.71	+0.3
4,013,381	-				+1.0
4,013,390	-				+0.1
4,013,397	-				+0.6
4,013,457	+	yddH	HEPCGN_26340	0.11	+0.2
4,013,760	+	yddH	HEPCGN_26340	0.64	-1.4
4,013,794	-	yddH	HEPCGN_26340	0.70	-0.3
4,013,794	-	yddH	HEPCGN_26340	0.70	-0.4
4,013,798	-	yddH	HEPCGN_26340	0.71	-0.3
4,013,862	+	yddH	HEPCGN_26340	0.82	-0.1
4,013,939	-				+1.7
4,014,080	-				+0.1
4,014,105	+				-0.2
4,014,106	-				+0.6
4,014,107	+				+0.6
4,014,108	-				-0.0
4,014,108	-				-0.7
4,014,174	+				-0.8
4,014,285	-	nhoA	HEPCGN_26345	0.17	-0.2
4,014,323	+	nhoA	HEPCGN_26345	0.22	+0.2
4,014,323	+	nhoA	HEPCGN_26345	0.22	-0.3
4,014,393	+	nhoA	HEPCGN_26345	0.30	+1.0
4,014,425	+	nhoA	HEPCGN_26345	0.34	-2.0
4,014,443	+	nhoA	HEPCGN_26345	0.36	-0.7
4,014,805	-	nhoA	HEPCGN_26345	0.79	-2.5
4,014,831	+	nhoA	HEPCGN_26345	0.82	-0.5
4,014,863	+	nhoA	HEPCGN_26345	0.86	+0.5
4,014,864	-	nhoA	HEPCGN_26345	0.86	+0.0
4,014,865	+	nhoA	HEPCGN_26345	0.86	-0.4
4,014,866	-	nhoA	HEPCGN_26345	0.86	+1.2