Strain Fitness in Escherichia coli ECOR38 around HEPCGN_25835

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,905,108	-				+0.1
3,905,312	+	ycjP	HEPCGN_25830	0.26	+1.0
3,905,356	-	ycjP	HEPCGN_25830	0.31	-0.6
3,905,361	+	ycjP	HEPCGN_25830	0.31	-0.1
3,905,361	+	ycjP	HEPCGN_25830	0.31	+0.2
3,905,362	-	ycjP	HEPCGN_25830	0.32	-0.5
3,905,509	-	ycjP	HEPCGN_25830	0.49	+0.3
3,905,510	+	ycjP	HEPCGN_25830	0.49	-0.3
3,905,510	+	ycjP	HEPCGN_25830	0.49	+1.0
3,905,511	-	ycjP	HEPCGN_25830	0.49	+0.1
3,905,511	-	ycjP	HEPCGN_25830	0.49	-0.1
3,905,511	-	ycjP	HEPCGN_25830	0.49	+0.7
3,905,586	-	ycjP	HEPCGN_25830	0.58	-1.7
3,905,586	-	ycjP	HEPCGN_25830	0.58	-0.3
3,905,716	+	ycjP	HEPCGN_25830	0.74	-1.2
3,905,781	+	ycjP	HEPCGN_25830	0.81	+3.8
3,905,820	-	ycjP	HEPCGN_25830	0.86	+0.3
3,905,820	-	ycjP	HEPCGN_25830	0.86	+0.7
3,905,875	+				+0.0
3,905,875	+				+0.2
3,905,880	-				-0.0
3,905,967	-				-0.2
3,905,983	-				+0.3
3,906,017	+				-0.4
3,906,137	-	ycjQ	HEPCGN_25835	0.16	+0.3
3,906,335	+	ycjQ	HEPCGN_25835	0.35	+0.2
3,906,336	-	ycjQ	HEPCGN_25835	0.35	+1.4
3,906,432	+	ycjQ	HEPCGN_25835	0.44	+1.0
3,906,732	-	ycjQ	HEPCGN_25835	0.72	-0.4
3,906,972	-				+1.1
3,907,160	-	ycjR	HEPCGN_25840	0.15	+2.2
3,907,162	-	ycjR	HEPCGN_25840	0.15	-1.7
3,907,272	+	ycjR	HEPCGN_25840	0.29	+0.1
3,907,355	-	ycjR	HEPCGN_25840	0.40	+1.8
3,907,532	+	ycjR	HEPCGN_25840	0.62	-0.3
3,907,655	-	ycjR	HEPCGN_25840	0.78	+0.3
3,907,754	+				+0.7
3,907,819	+				+1.0
3,907,881	+				+0.6
3,907,922	+				-1.3