Strain Fitness in Escherichia coli ECOR38 around HEPCGN_25610

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,858,459	-	cysB	HEPCGN_25600	0.60	-1.3
3,858,460	+	cysB	HEPCGN_25600	0.61	-0.6
3,858,460	+	cysB	HEPCGN_25600	0.61	+0.3
3,858,461	-	cysB	HEPCGN_25600	0.61	+0.6
3,858,673	+	cysB	HEPCGN_25600	0.82	-0.1
3,858,673	+	cysB	HEPCGN_25600	0.82	+0.3
3,858,701	-	cysB	HEPCGN_25600	0.85	-0.6
3,858,871	+				-1.1
3,858,981	-				+0.2
3,859,018	-				-1.2
3,859,041	-				+0.9
3,859,163	-				+0.1
3,859,163	-				+0.4
3,859,215	+	ymiA	HEPCGN_25605	0.31	+0.0
3,859,215	+	ymiA	HEPCGN_25605	0.31	-0.3
3,859,305	+				-0.2
3,859,305	+				-0.2
3,859,305	+				-1.5
3,859,306	-				-1.0
3,859,306	-				+0.1
3,859,340	+		HEPCGN_25610	0.20	+0.1
3,859,340	+		HEPCGN_25610	0.20	-1.4
3,859,581	+				+0.8
3,859,587	-				-0.3
3,859,601	+				-0.4
3,859,674	-	ymiC	HEPCGN_25620	0.89	+0.6
3,859,791	+				+0.1
3,859,861	-				+0.3
3,859,861	-				-0.3
3,859,913	+				+0.2
3,860,315	+	acnA	HEPCGN_25625	0.17	-0.4
3,860,315	+	acnA	HEPCGN_25625	0.17	-0.2
3,860,315	+	acnA	HEPCGN_25625	0.17	-0.3