Strain Fitness in Escherichia coli ECOR38 around HEPCGN_25095

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,772,248	+	ychE	HEPCGN_25080	0.63	-0.2
3,772,263	+	ychE	HEPCGN_25080	0.65	-0.2
3,772,281	+	ychE	HEPCGN_25080	0.68	-1.1
3,772,281	+	ychE	HEPCGN_25080	0.68	-0.3
3,772,281	+	ychE	HEPCGN_25080	0.68	+0.6
3,772,281	+	ychE	HEPCGN_25080	0.68	-0.8
3,772,282	-	ychE	HEPCGN_25080	0.68	+0.2
3,772,404	+	ychE	HEPCGN_25080	0.87	-0.7
3,772,407	+	ychE	HEPCGN_25080	0.87	+0.2
3,772,408	-	ychE	HEPCGN_25080	0.88	-0.9
3,772,415	+	ychE	HEPCGN_25080	0.89	+0.1
3,772,486	+				+0.2
3,772,486	+				-0.1
3,772,487	-				-0.3
3,772,525	+				+0.8
3,772,690	+		HEPCGN_25090	0.27	+1.6
3,772,691	-		HEPCGN_25090	0.28	+0.8
3,773,023	+				+0.1
3,773,024	-				+0.5
3,773,063	-				+0.8
3,773,063	-				+0.3
3,773,063	-				-1.2
3,773,093	-				+0.3
3,773,107	+				-0.2
3,773,108	-				+1.5
3,773,108	-				-0.2
3,773,110	+				-0.3
3,773,111	-				-0.2
3,773,111	-				-0.2
3,773,125	+				-0.2
3,773,176	+				+0.7
3,773,177	-				-0.0
3,773,198	+				-0.7
3,773,199	-				-1.6
3,773,202	+				-1.4
3,773,254	+				-0.9
3,773,254	+				+0.0
3,773,354	+	oppA	HEPCGN_25095	0.10	-0.3
3,773,354	+	oppA	HEPCGN_25095	0.10	-1.1
3,773,380	+	oppA	HEPCGN_25095	0.12	-0.5
3,773,414	+	oppA	HEPCGN_25095	0.14	+0.4
3,773,415	-	oppA	HEPCGN_25095	0.14	-0.3
3,773,417	+	oppA	HEPCGN_25095	0.14	+0.6
3,773,586	+	oppA	HEPCGN_25095	0.24	+0.3
3,773,589	-	oppA	HEPCGN_25095	0.24	-0.2
3,773,589	-	oppA	HEPCGN_25095	0.24	+0.1
3,773,734	+	oppA	HEPCGN_25095	0.33	-0.6
3,773,734	+	oppA	HEPCGN_25095	0.33	-0.1
3,773,735	-	oppA	HEPCGN_25095	0.33	+0.3
3,773,770	-	oppA	HEPCGN_25095	0.35	+0.3
3,773,777	-	oppA	HEPCGN_25095	0.36	-0.2
3,773,777	-	oppA	HEPCGN_25095	0.36	-2.9
3,773,875	-	oppA	HEPCGN_25095	0.41	+0.3
3,773,875	-	oppA	HEPCGN_25095	0.41	+0.3
3,773,932	-	oppA	HEPCGN_25095	0.45	+0.2
3,773,957	+	oppA	HEPCGN_25095	0.46	-0.7
3,773,966	-	oppA	HEPCGN_25095	0.47	+1.4
3,773,971	-	oppA	HEPCGN_25095	0.47	+0.2
3,774,015	-	oppA	HEPCGN_25095	0.50	-0.2
3,774,036	+	oppA	HEPCGN_25095	0.51	-0.5
3,774,037	-	oppA	HEPCGN_25095	0.51	+0.1
3,774,038	+	oppA	HEPCGN_25095	0.51	-2.3
3,774,039	-	oppA	HEPCGN_25095	0.51	-0.8
3,774,108	+	oppA	HEPCGN_25095	0.55	-2.6
3,774,109	-	oppA	HEPCGN_25095	0.55	-1.0
3,774,124	-	oppA	HEPCGN_25095	0.56	-0.3
3,774,135	-	oppA	HEPCGN_25095	0.57	-0.5
3,774,155	+	oppA	HEPCGN_25095	0.58	-0.3
3,774,155	+	oppA	HEPCGN_25095	0.58	-0.6
3,774,155	+	oppA	HEPCGN_25095	0.58	-0.4
3,774,246	+	oppA	HEPCGN_25095	0.64	+0.0
3,774,247	-	oppA	HEPCGN_25095	0.64	-1.3
3,774,266	+	oppA	HEPCGN_25095	0.65	-0.3
3,774,266	+	oppA	HEPCGN_25095	0.65	-0.4
3,774,266	+	oppA	HEPCGN_25095	0.65	-0.9
3,774,266	+	oppA	HEPCGN_25095	0.65	-0.0
3,774,266	+	oppA	HEPCGN_25095	0.65	-0.3
3,774,267	-	oppA	HEPCGN_25095	0.65	+1.6
3,774,267	-	oppA	HEPCGN_25095	0.65	+0.9
3,774,267	-	oppA	HEPCGN_25095	0.65	+0.6
3,774,360	+	oppA	HEPCGN_25095	0.70	+0.7
3,774,398	+	oppA	HEPCGN_25095	0.73	-1.6
3,774,466	+	oppA	HEPCGN_25095	0.77	-0.0
3,774,561	+	oppA	HEPCGN_25095	0.82	+0.5
3,774,624	+	oppA	HEPCGN_25095	0.86	-0.5
3,774,625	-	oppA	HEPCGN_25095	0.86	+2.1
3,774,626	+	oppA	HEPCGN_25095	0.86	-0.0
3,774,627	-	oppA	HEPCGN_25095	0.86	-0.8
3,774,753	+				-1.0
3,774,756	+				-0.0
3,774,757	-				+1.2
3,774,757	-				+0.3
3,774,821	+				-0.1
3,774,821	+				+1.6
3,774,826	-				-0.4
3,774,826	-				-0.4
3,774,841	-				-0.4
3,774,841	-				-0.1
3,774,841	-				-1.4
3,774,864	+				-0.2
3,774,905	+				-0.4
3,774,959	+				-0.1
3,774,994	-				-0.5
3,774,999	+				-2.6
3,774,999	+				+0.5
3,775,005	+				-0.3
3,775,006	-				-0.6
3,775,064	+	oppB	HEPCGN_25100	0.13	+1.2
3,775,108	-	oppB	HEPCGN_25100	0.18	+0.3
3,775,108	-	oppB	HEPCGN_25100	0.18	-0.6
3,775,129	+	oppB	HEPCGN_25100	0.20	-1.1
3,775,271	+	oppB	HEPCGN_25100	0.36	-0.0
3,775,327	+	oppB	HEPCGN_25100	0.42	+0.1
3,775,329	+	oppB	HEPCGN_25100	0.42	-0.4
3,775,389	-	oppB	HEPCGN_25100	0.48	-0.3
3,775,391	+	oppB	HEPCGN_25100	0.49	-0.5
3,775,392	-	oppB	HEPCGN_25100	0.49	-1.1
3,775,495	+	oppB	HEPCGN_25100	0.60	-0.4
3,775,495	+	oppB	HEPCGN_25100	0.60	-1.3
3,775,496	-	oppB	HEPCGN_25100	0.60	-0.5
3,775,496	-	oppB	HEPCGN_25100	0.60	-0.4
3,775,531	-	oppB	HEPCGN_25100	0.64	-0.8
3,775,588	-	oppB	HEPCGN_25100	0.70	+0.5
3,775,588	-	oppB	HEPCGN_25100	0.70	-0.2
3,775,616	+	oppB	HEPCGN_25100	0.73	+1.3
3,775,617	-	oppB	HEPCGN_25100	0.73	-0.1
3,775,645	+	oppB	HEPCGN_25100	0.76	-0.3
3,775,645	+	oppB	HEPCGN_25100	0.76	-0.3
3,775,647	+	oppB	HEPCGN_25100	0.76	-0.2
3,775,648	-	oppB	HEPCGN_25100	0.77	-0.2
3,775,683	+	oppB	HEPCGN_25100	0.80	+0.1
3,775,683	+	oppB	HEPCGN_25100	0.80	+0.0
3,775,683	+	oppB	HEPCGN_25100	0.80	-0.7
3,775,684	-	oppB	HEPCGN_25100	0.80	-0.8
3,775,756	+	oppB	HEPCGN_25100	0.88	-1.9
3,775,763	+	oppB	HEPCGN_25100	0.89	+0.4
3,775,769	+	oppB	HEPCGN_25100	0.90	-0.2
3,775,770	-	oppB	HEPCGN_25100	0.90	+0.1
3,775,829	+				+0.9
3,775,829	+				+0.0
3,775,829	+				-0.8
3,775,829	+				-0.2
3,775,830	-				-0.1
3,775,830	-				-0.3
3,775,853	+				+0.8