Strain Fitness in Escherichia coli ECOR38 around HEPCGN_24690

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,691,330	+		HEPCGN_24680	0.45	+1.0
3,691,331	-		HEPCGN_24680	0.45	+1.5
3,691,334	+		HEPCGN_24680	0.46	-0.7
3,691,334	+		HEPCGN_24680	0.46	-0.1
3,691,349	+		HEPCGN_24680	0.50	+1.1
3,691,394	+		HEPCGN_24680	0.61	+1.1
3,691,395	-		HEPCGN_24680	0.61	-0.8
3,691,395	-		HEPCGN_24680	0.61	-0.3
3,691,396	+		HEPCGN_24680	0.61	-0.4
3,691,396	+		HEPCGN_24680	0.61	+0.7
3,691,397	-		HEPCGN_24680	0.62	+0.6
3,691,400	+		HEPCGN_24680	0.62	+0.3
3,691,401	-		HEPCGN_24680	0.63	+0.8
3,691,406	-		HEPCGN_24680	0.64	-0.9
3,691,521	+				+1.2
3,691,551	-				-0.7
3,691,551	-				-0.8
3,691,551	-				+0.5
3,691,575	+				-1.7
3,691,588	+				-0.2
3,691,678	-				-0.4
3,691,752	+				-0.2
3,691,752	+				-0.2
3,691,753	-				+0.7
3,691,753	-				+0.2
3,691,790	+				+0.9
3,691,791	-				-0.1
3,691,806	+				-0.6
3,691,807	-				+0.6
3,691,807	-				-0.0
3,691,837	+	ycgL	HEPCGN_24685	0.16	-1.9
3,691,838	-	ycgL	HEPCGN_24685	0.16	-0.6
3,691,995	+	ycgL	HEPCGN_24685	0.69	-1.8
3,691,996	-	ycgL	HEPCGN_24685	0.70	+1.2
3,692,082	+				-0.2
3,692,105	+				-0.5
3,692,156	-				-3.2
3,692,156	-				+0.1
3,692,156	-				-0.7
3,692,159	+				+0.1
3,692,159	+				-1.4
3,692,159	+				+0.2
3,692,160	-				+0.0
3,692,206	+				+0.1
3,692,211	+				-0.8
3,692,227	+	ycgM	HEPCGN_24690	0.11	+0.2
3,692,228	-	ycgM	HEPCGN_24690	0.11	-0.6
3,692,242	+	ycgM	HEPCGN_24690	0.13	+0.7
3,692,290	+	ycgM	HEPCGN_24690	0.20	-0.2
3,692,635	+	ycgM	HEPCGN_24690	0.73	-1.0
3,692,679	-	ycgM	HEPCGN_24690	0.79	+0.3
3,692,680	+	ycgM	HEPCGN_24690	0.79	-1.0
3,692,873	+				+1.3
3,692,874	-				-0.7
3,692,890	+				+0.8
3,692,891	-				+1.1
3,692,917	+				+0.4
3,692,917	+				+0.4
3,692,917	+				+1.3
3,693,134	-	ycgN	HEPCGN_24695	0.51	-1.2
3,693,212	-	ycgN	HEPCGN_24695	0.68	+0.0
3,693,281	+	ycgN	HEPCGN_24695	0.84	+1.0
3,693,390	+				+0.1
3,693,390	+				-0.3
3,693,391	-				+0.8