Strain Fitness in Escherichia coli ECOR38 around HEPCGN_24675

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,689,731	-	minC	HEPCGN_24670	0.41	+0.9
3,689,759	-	minC	HEPCGN_24670	0.45	-1.6
3,689,759	-	minC	HEPCGN_24670	0.45	+0.5
3,689,759	-	minC	HEPCGN_24670	0.45	+0.1
3,689,909	-	minC	HEPCGN_24670	0.67	-1.2
3,689,996	-	minC	HEPCGN_24670	0.79	+0.4
3,689,996	-	minC	HEPCGN_24670	0.79	+0.6
3,690,067	-	minC	HEPCGN_24670	0.89	+0.3
3,690,163	-				-0.1
3,690,203	-				+0.3
3,690,225	-				-0.9
3,690,352	+				+1.5
3,690,353	-				-2.2
3,690,357	-				-0.8
3,690,494	+				-0.5
3,690,495	-				+0.6
3,690,529	+				+0.1
3,690,534	+				-2.2
3,690,576	+				-0.6
3,690,576	+				+0.1
3,690,576	+				+0.1
3,690,577	-				+0.1
3,690,627	+				+2.1
3,690,627	+				+0.1
3,690,637	-				+1.1
3,690,666	+				+0.8
3,690,667	-				-0.3
3,690,786	+	ycgJ	HEPCGN_24675	0.34	-0.5
3,690,795	+	ycgJ	HEPCGN_24675	0.36	+1.1
3,690,869	+	ycgJ	HEPCGN_24675	0.56	-1.3
3,690,970	-	ycgJ	HEPCGN_24675	0.84	+0.1
3,691,014	+				-1.6
3,691,014	+				-1.4
3,691,015	-				+0.0
3,691,045	-				-0.2
3,691,330	+		HEPCGN_24680	0.45	+1.0
3,691,331	-		HEPCGN_24680	0.45	+1.5
3,691,334	+		HEPCGN_24680	0.46	-0.7
3,691,334	+		HEPCGN_24680	0.46	-0.1
3,691,349	+		HEPCGN_24680	0.50	+1.1
3,691,394	+		HEPCGN_24680	0.61	+1.1
3,691,395	-		HEPCGN_24680	0.61	-0.8
3,691,395	-		HEPCGN_24680	0.61	-0.3
3,691,396	+		HEPCGN_24680	0.61	-0.4
3,691,396	+		HEPCGN_24680	0.61	+0.7
3,691,397	-		HEPCGN_24680	0.62	+0.6
3,691,400	+		HEPCGN_24680	0.62	+0.3
3,691,401	-		HEPCGN_24680	0.63	+0.8
3,691,406	-		HEPCGN_24680	0.64	-0.9
3,691,521	+				+1.2
3,691,551	-				-0.7
3,691,551	-				-0.8
3,691,551	-				+0.5
3,691,575	+				-1.7
3,691,588	+				-0.2
3,691,678	-				-0.4
3,691,752	+				-0.2
3,691,752	+				-0.2
3,691,753	-				+0.7
3,691,753	-				+0.2
3,691,790	+				+0.9
3,691,791	-				-0.1
3,691,806	+				-0.6
3,691,807	-				+0.6
3,691,807	-				-0.0
3,691,837	+	ycgL	HEPCGN_24685	0.16	-1.9
3,691,838	-	ycgL	HEPCGN_24685	0.16	-0.6
3,691,995	+	ycgL	HEPCGN_24685	0.69	-1.8
3,691,996	-	ycgL	HEPCGN_24685	0.70	+1.2