Strain Fitness in Escherichia coli ECOR38 around HEPCGN_24105

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,608,627	-				-1.9
3,608,627	-				-1.0
3,608,764	-				+1.2
3,608,764	-				-0.5
3,609,227	+				+0.8
3,609,228	-				-0.3
3,609,309	+				+0.3
3,609,310	-				-0.7
3,609,325	+				-0.1
3,609,365	-		HEPCGN_24100	0.25	+1.6
3,609,369	-		HEPCGN_24100	0.27	-1.1
3,609,478	-		HEPCGN_24100	0.80	-1.4
3,609,516	-				-0.7
3,609,550	-				-0.3
3,609,597	-		HEPCGN_24105	0.19	+0.4
3,609,763	+		HEPCGN_24105	0.54	+0.5
3,609,763	+		HEPCGN_24105	0.54	-0.2
3,609,764	-		HEPCGN_24105	0.55	-0.1
3,609,764	-		HEPCGN_24105	0.55	+0.9
3,609,811	+		HEPCGN_24105	0.65	-0.7
3,609,842	+		HEPCGN_24105	0.71	-0.1
3,609,871	+		HEPCGN_24105	0.78	-1.2
3,609,932	+				-1.1
3,609,972	+				+0.2
3,609,973	-				-2.2
3,610,048	-		HEPCGN_24115	0.36	+0.1
3,610,053	-		HEPCGN_24115	0.38	+0.4
3,610,053	-		HEPCGN_24115	0.38	+1.1
3,610,111	-		HEPCGN_24115	0.63	+1.4
3,610,111	-		HEPCGN_24115	0.63	-0.7
3,610,128	+		HEPCGN_24115	0.71	+0.5
3,610,140	-		HEPCGN_24115	0.76	-0.9
3,610,223	+				-0.7
3,610,282	-		HEPCGN_24120	0.27	-0.8
3,610,350	+		HEPCGN_24120	0.50	+1.1
3,610,451	+		HEPCGN_24120	0.84	+0.6
3,610,557	+				+2.7
3,610,891	+		HEPCGN_24125	0.23	-1.3
3,610,892	-		HEPCGN_24125	0.23	-0.5