Strain Fitness in Escherichia coli ECOR38 around HEPCGN_23950

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,576,472	+	ptsG	HEPCGN_23945	0.41	-0.5
3,576,527	+	ptsG	HEPCGN_23945	0.45	+0.6
3,576,553	+	ptsG	HEPCGN_23945	0.47	+2.5
3,576,554	-	ptsG	HEPCGN_23945	0.47	+0.9
3,576,554	-	ptsG	HEPCGN_23945	0.47	+0.3
3,576,600	+	ptsG	HEPCGN_23945	0.50	-0.2
3,576,601	-	ptsG	HEPCGN_23945	0.50	+0.7
3,576,601	-	ptsG	HEPCGN_23945	0.50	+2.3
3,576,697	-	ptsG	HEPCGN_23945	0.57	+0.0
3,576,726	+	ptsG	HEPCGN_23945	0.59	-0.1
3,576,814	+	ptsG	HEPCGN_23945	0.65	+2.7
3,576,882	+	ptsG	HEPCGN_23945	0.70	-0.4
3,576,982	+	ptsG	HEPCGN_23945	0.77	+0.2
3,576,983	-	ptsG	HEPCGN_23945	0.77	-0.3
3,577,008	+	ptsG	HEPCGN_23945	0.79	-0.4
3,577,072	-	ptsG	HEPCGN_23945	0.83	+0.1
3,577,125	+	ptsG	HEPCGN_23945	0.87	-0.3
3,577,125	+	ptsG	HEPCGN_23945	0.87	+0.4
3,577,126	-	ptsG	HEPCGN_23945	0.87	+0.1
3,577,143	+	ptsG	HEPCGN_23945	0.88	+0.4
3,577,143	+	ptsG	HEPCGN_23945	0.88	-0.1
3,577,144	-	ptsG	HEPCGN_23945	0.88	+0.4
3,577,144	-	ptsG	HEPCGN_23945	0.88	+1.2
3,577,144	-	ptsG	HEPCGN_23945	0.88	-0.8
3,577,223	+				+0.8
3,577,223	+				+0.6
3,577,260	+				-0.6
3,577,297	+				+0.4
3,577,312	+				+0.7
3,577,320	-				-0.7
3,577,336	+				+1.3
3,577,427	+		HEPCGN_23950	0.18	-0.7
3,577,537	+		HEPCGN_23950	0.56	+0.3
3,577,541	+		HEPCGN_23950	0.57	-0.4
3,577,542	-		HEPCGN_23950	0.58	-0.7
3,577,542	-		HEPCGN_23950	0.58	+1.1
3,577,542	-		HEPCGN_23950	0.58	-1.5
3,577,586	+		HEPCGN_23950	0.73	-0.4
3,577,589	-		HEPCGN_23950	0.74	-0.8
3,577,608	-		HEPCGN_23950	0.80	-0.1
3,577,725	-				+0.4
3,577,764	-				+1.0
3,577,797	-				-1.7
3,577,823	-				+1.4
3,577,823	-				+0.0
3,577,878	-				-1.4
3,577,878	-				+0.8
3,577,981	+	fhuE	HEPCGN_23955	0.13	-0.1
3,578,027	+	fhuE	HEPCGN_23955	0.15	+0.0
3,578,027	+	fhuE	HEPCGN_23955	0.15	+0.3
3,578,029	+	fhuE	HEPCGN_23955	0.15	-0.2
3,578,029	+	fhuE	HEPCGN_23955	0.15	+0.0
3,578,030	-	fhuE	HEPCGN_23955	0.15	+0.3
3,578,030	-	fhuE	HEPCGN_23955	0.15	-1.9
3,578,030	-	fhuE	HEPCGN_23955	0.15	+0.1
3,578,030	-	fhuE	HEPCGN_23955	0.15	-0.4
3,578,110	+	fhuE	HEPCGN_23955	0.20	+0.1
3,578,139	-	fhuE	HEPCGN_23955	0.21	+0.4
3,578,197	+	fhuE	HEPCGN_23955	0.25	+0.1
3,578,197	+	fhuE	HEPCGN_23955	0.25	-0.8
3,578,197	+	fhuE	HEPCGN_23955	0.25	-1.7
3,578,198	-	fhuE	HEPCGN_23955	0.25	+2.9
3,578,210	+	fhuE	HEPCGN_23955	0.25	-0.4
3,578,273	+	fhuE	HEPCGN_23955	0.29	-0.9
3,578,329	+	fhuE	HEPCGN_23955	0.32	+0.6
3,578,368	-	fhuE	HEPCGN_23955	0.34	-0.2
3,578,395	+	fhuE	HEPCGN_23955	0.36	+2.7
3,578,396	-	fhuE	HEPCGN_23955	0.36	+1.2
3,578,467	+	fhuE	HEPCGN_23955	0.40	+1.3
3,578,485	+	fhuE	HEPCGN_23955	0.41	+0.2
3,578,485	+	fhuE	HEPCGN_23955	0.41	-0.4
3,578,486	-	fhuE	HEPCGN_23955	0.41	+0.5
3,578,489	+	fhuE	HEPCGN_23955	0.41	-0.3
3,578,494	+	fhuE	HEPCGN_23955	0.41	+0.4
3,578,511	-	fhuE	HEPCGN_23955	0.42	-0.1
3,578,527	-	fhuE	HEPCGN_23955	0.43	-0.7
3,578,530	+	fhuE	HEPCGN_23955	0.43	-0.5
3,578,531	-	fhuE	HEPCGN_23955	0.43	+0.5
3,578,531	-	fhuE	HEPCGN_23955	0.43	-0.6
3,578,531	-	fhuE	HEPCGN_23955	0.43	-0.1
3,578,531	-	fhuE	HEPCGN_23955	0.43	+0.1
3,578,542	+	fhuE	HEPCGN_23955	0.44	-0.2
3,578,542	+	fhuE	HEPCGN_23955	0.44	-0.1
3,578,542	+	fhuE	HEPCGN_23955	0.44	-0.1
3,578,543	-	fhuE	HEPCGN_23955	0.44	-0.4
3,578,543	-	fhuE	HEPCGN_23955	0.44	+0.2
3,578,651	+	fhuE	HEPCGN_23955	0.50	+0.3
3,578,659	+	fhuE	HEPCGN_23955	0.50	-0.3