Strain Fitness in Escherichia coli ECOR38 around HEPCGN_23825

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,552,615	+				-0.9
3,552,630	-				-0.6
3,552,658	-				-0.2
3,552,661	+				-0.2
3,552,661	+				+0.2
3,552,662	-				+0.8
3,552,662	-				+0.7
3,552,712	+				+0.6
3,552,749	+				+0.2
3,552,749	+				-0.0
3,552,750	-				+1.1
3,552,775	+				+0.6
3,552,776	-				+0.4
3,553,043	+	flgB	HEPCGN_23815	0.70	+0.1
3,553,043	+	flgB	HEPCGN_23815	0.70	+0.2
3,553,096	-	flgB	HEPCGN_23815	0.83	-0.2
3,553,312	+	flgC	HEPCGN_23820	0.35	-0.4
3,553,402	-	flgC	HEPCGN_23820	0.57	-0.3
3,553,438	-	flgC	HEPCGN_23820	0.66	-0.1
3,553,503	+	flgC	HEPCGN_23820	0.82	-0.2
3,553,585	+				-1.0
3,553,585	+				-2.3
3,553,585	+				+0.0
3,553,642	+				-0.7
3,553,646	-				+0.7
3,553,785	+	flgD	HEPCGN_23825	0.29	+0.7
3,554,083	+	flgD	HEPCGN_23825	0.71	-0.1
3,554,121	-	flgD	HEPCGN_23825	0.77	+1.3
3,554,279	+				-0.5
3,554,362	+				+0.1
3,554,393	+				-1.2
3,554,585	+	flgE	HEPCGN_23830	0.23	+0.8
3,554,586	-	flgE	HEPCGN_23830	0.23	+1.0
3,554,635	+	flgE	HEPCGN_23830	0.27	+1.0
3,554,806	+	flgE	HEPCGN_23830	0.42	+0.1
3,554,833	+	flgE	HEPCGN_23830	0.44	-0.4
3,554,837	+	flgE	HEPCGN_23830	0.44	+0.1
3,554,838	-	flgE	HEPCGN_23830	0.44	-0.2
3,554,879	-	flgE	HEPCGN_23830	0.48	-1.4
3,554,890	+	flgE	HEPCGN_23830	0.49	+0.5
3,554,891	-	flgE	HEPCGN_23830	0.49	-0.4
3,554,891	-	flgE	HEPCGN_23830	0.49	-0.4
3,554,947	+	flgE	HEPCGN_23830	0.53	-0.2
3,554,996	-	flgE	HEPCGN_23830	0.57	-1.5
3,555,038	-	flgE	HEPCGN_23830	0.61	-0.1
3,555,098	-	flgE	HEPCGN_23830	0.66	-0.8
3,555,098	-	flgE	HEPCGN_23830	0.66	+1.4
3,555,174	-	flgE	HEPCGN_23830	0.72	-0.4
3,555,210	-	flgE	HEPCGN_23830	0.75	+0.1
3,555,243	+	flgE	HEPCGN_23830	0.78	+0.4