Strain Fitness in Escherichia coli ECOR38 around HEPCGN_19665

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,688,399	-	truD	HEPCGN_19655	0.81	+0.4
2,688,399	-	truD	HEPCGN_19655	0.81	+2.1
2,688,467	+	truD	HEPCGN_19655	0.88	+0.3
2,688,555	+				-0.1
2,688,555	+				+0.3
2,688,555	+				-1.2
2,688,555	+				-0.2
2,688,555	+				+0.6
2,688,556	-				-1.7
2,688,556	-				-0.9
2,688,556	-				-0.0
2,688,556	-				+0.5
2,688,575	-				+0.3
2,688,607	-				-1.1
2,688,607	-				-0.6
2,688,622	-				+0.1
2,688,622	-				-0.7
2,688,736	+	surE	HEPCGN_19660	0.21	+0.6
2,688,737	-	surE	HEPCGN_19660	0.21	+1.9
2,688,754	+	surE	HEPCGN_19660	0.23	+0.7
2,688,878	-	surE	HEPCGN_19660	0.40	+0.4
2,688,958	+	surE	HEPCGN_19660	0.50	+0.1
2,688,959	-	surE	HEPCGN_19660	0.50	-0.1
2,688,965	+	surE	HEPCGN_19660	0.51	+0.5
2,689,043	-	surE	HEPCGN_19660	0.61	+0.2
2,689,043	-	surE	HEPCGN_19660	0.61	-0.5
2,689,084	+	surE	HEPCGN_19660	0.67	+0.2
2,689,084	+	surE	HEPCGN_19660	0.67	+0.8
2,689,085	-	surE	HEPCGN_19660	0.67	+0.6
2,689,105	+	surE	HEPCGN_19660	0.70	+0.3
2,689,106	-	surE	HEPCGN_19660	0.70	+1.0
2,689,106	-	surE	HEPCGN_19660	0.70	-0.4
2,689,156	+	surE	HEPCGN_19660	0.76	-0.3
2,689,156	+	surE	HEPCGN_19660	0.76	-0.2
2,689,224	+	surE	HEPCGN_19660	0.85	-1.4
2,689,225	-	surE	HEPCGN_19660	0.85	+0.6
2,689,235	+	surE	HEPCGN_19660	0.87	-1.9
2,689,236	-	surE	HEPCGN_19660	0.87	+0.3
2,689,236	-	surE	HEPCGN_19660	0.87	-0.7
2,689,236	-	surE	HEPCGN_19660	0.87	+1.6
2,689,266	+				+0.9
2,689,286	+				+0.3
2,689,286	+				+1.1
2,689,287	-				+1.4
2,689,287	-				-1.2
2,689,287	-				-0.2
2,689,287	-				+0.8
2,689,346	+				+0.4
2,689,346	+				+0.2
2,689,380	+				-0.2
2,689,381	-				-0.6
2,689,484	+	pcm	HEPCGN_19665	0.25	-0.0
2,689,514	-	pcm	HEPCGN_19665	0.29	-0.7
2,689,515	+	pcm	HEPCGN_19665	0.30	-1.4
2,689,515	+	pcm	HEPCGN_19665	0.30	-1.3
2,689,698	+	pcm	HEPCGN_19665	0.59	+0.5
2,689,861	+	pcm	HEPCGN_19665	0.85	+0.6
2,689,969	+				-0.7
2,689,970	-				-0.1
2,689,988	+				-1.6
2,690,037	-				-0.6
2,690,058	-				-1.2
2,690,058	-				+0.5
2,690,058	-				+2.1
2,690,093	+				-0.6
2,690,094	-				-0.6
2,690,285	-	nlpD	HEPCGN_19670	0.17	+1.7
2,690,386	-	nlpD	HEPCGN_19670	0.25	+1.2
2,690,458	+	nlpD	HEPCGN_19670	0.32	-0.6
2,690,462	+	nlpD	HEPCGN_19670	0.32	+0.5
2,690,462	+	nlpD	HEPCGN_19670	0.32	-0.3
2,690,464	+	nlpD	HEPCGN_19670	0.32	-0.4
2,690,464	+	nlpD	HEPCGN_19670	0.32	-0.0
2,690,464	+	nlpD	HEPCGN_19670	0.32	+0.6
2,690,465	-	nlpD	HEPCGN_19670	0.32	+0.1
2,690,494	+	nlpD	HEPCGN_19670	0.35	+0.7
2,690,495	-	nlpD	HEPCGN_19670	0.35	+1.2
2,690,506	+	nlpD	HEPCGN_19670	0.36	+0.2
2,690,545	+	nlpD	HEPCGN_19670	0.39	+1.6
2,690,558	+	nlpD	HEPCGN_19670	0.41	-0.2
2,690,584	-	nlpD	HEPCGN_19670	0.43	-0.2
2,690,716	+	nlpD	HEPCGN_19670	0.54	+1.4
2,690,716	+	nlpD	HEPCGN_19670	0.54	+1.4
2,690,716	+	nlpD	HEPCGN_19670	0.54	+0.7
2,690,717	-	nlpD	HEPCGN_19670	0.54	+2.1
2,690,721	-	nlpD	HEPCGN_19670	0.55	+1.0
2,690,803	-	nlpD	HEPCGN_19670	0.62	+1.6
2,690,845	+	nlpD	HEPCGN_19670	0.66	+1.1
2,690,845	+	nlpD	HEPCGN_19670	0.66	+0.8
2,690,845	+	nlpD	HEPCGN_19670	0.66	+3.0
2,690,846	-	nlpD	HEPCGN_19670	0.66	+1.8
2,690,846	-	nlpD	HEPCGN_19670	0.66	+1.6
2,690,864	-	nlpD	HEPCGN_19670	0.67	+1.7