Strain Fitness in Escherichia coli ECOR38 around HEPCGN_18115
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
2,371,265 | + | neuD | HEPCGN_18110 | 0.53 | -1.1 |
2,371,367 | + | neuD | HEPCGN_18110 | 0.70 | +0.3 |
2,371,425 | - | neuD | HEPCGN_18110 | 0.79 | -0.1 |
2,371,506 | - | -0.2 | |||
2,371,563 | + | +1.2 | |||
2,371,565 | + | +0.8 | |||
2,371,784 | + | neuB | HEPCGN_18115 | 0.22 | +0.8 |
2,372,509 | + | -0.7 | |||
2,372,592 | - | -0.4 | |||
2,372,692 | + | -0.6 | |||
2,372,782 | + | neuA | HEPCGN_18120 | 0.15 | -2.4 |
2,372,782 | + | neuA | HEPCGN_18120 | 0.15 | -1.4 |
2,372,869 | + | neuA | HEPCGN_18120 | 0.22 | -0.4 |
Or see this region's nucleotide sequence