Strain Fitness in Escherichia coli ECOR38 around HEPCGN_16840

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,119,398	-	kdsC	HEPCGN_16835	0.44	-0.9
2,119,430	-	kdsC	HEPCGN_16835	0.50	+0.3
2,119,587	-	kdsC	HEPCGN_16835	0.77	-0.4
2,119,587	-	kdsC	HEPCGN_16835	0.77	+0.1
2,119,724	-				-0.3
2,119,769	-				+0.9
2,119,769	-				+0.7
2,119,773	-				-0.2
2,119,820	-				-0.4
2,119,878	-	kdsD	HEPCGN_16840	0.14	-0.7
2,119,878	-	kdsD	HEPCGN_16840	0.14	+0.1
2,119,878	-	kdsD	HEPCGN_16840	0.14	-0.3
2,119,911	-	kdsD	HEPCGN_16840	0.18	+0.4
2,119,950	-	kdsD	HEPCGN_16840	0.22	+0.4
2,119,985	-	kdsD	HEPCGN_16840	0.25	-0.4
2,120,065	+	kdsD	HEPCGN_16840	0.33	-0.2
2,120,065	+	kdsD	HEPCGN_16840	0.33	-1.1
2,120,096	-	kdsD	HEPCGN_16840	0.36	-1.3
2,120,096	-	kdsD	HEPCGN_16840	0.36	+0.1
2,120,098	+	kdsD	HEPCGN_16840	0.37	-0.0
2,120,099	-	kdsD	HEPCGN_16840	0.37	+0.0
2,120,170	+	kdsD	HEPCGN_16840	0.44	+0.1
2,120,277	-	kdsD	HEPCGN_16840	0.55	-0.2
2,120,351	+	kdsD	HEPCGN_16840	0.62	+0.3
2,120,365	+	kdsD	HEPCGN_16840	0.64	-0.3
2,120,411	-	kdsD	HEPCGN_16840	0.68	+0.0
2,120,450	+	kdsD	HEPCGN_16840	0.72	-1.0
2,120,450	+	kdsD	HEPCGN_16840	0.72	+1.5
2,120,451	-	kdsD	HEPCGN_16840	0.72	+0.1
2,120,451	-	kdsD	HEPCGN_16840	0.72	-0.3
2,120,451	-	kdsD	HEPCGN_16840	0.72	-3.0
2,120,625	+				-0.3
2,120,625	+				-0.4
2,120,625	+				-2.3
2,120,626	-				+0.4
2,120,626	-				+0.1
2,120,674	+				+3.1
2,120,705	+				-1.3
2,120,706	-				-0.2
2,120,712	-				-0.0
2,120,712	-				+0.4
2,120,722	+				-0.5
2,120,723	-				+0.3
2,120,764	+				-0.6
2,120,765	-				-0.1
2,120,799	+				+0.6
2,120,800	-				+1.0
2,120,800	-				+0.5
2,120,805	+				-0.5
2,120,960	+	yrbG	HEPCGN_16845	0.23	+0.4
2,120,982	-	yrbG	HEPCGN_16845	0.25	+0.4
2,120,984	+	yrbG	HEPCGN_16845	0.25	-1.4
2,120,985	-	yrbG	HEPCGN_16845	0.25	-1.6
2,120,985	-	yrbG	HEPCGN_16845	0.25	-0.0
2,120,985	-	yrbG	HEPCGN_16845	0.25	-0.1
2,121,106	+	yrbG	HEPCGN_16845	0.38	+1.0
2,121,164	+	yrbG	HEPCGN_16845	0.44	+0.4
2,121,164	+	yrbG	HEPCGN_16845	0.44	+0.7
2,121,165	-	yrbG	HEPCGN_16845	0.44	-0.9
2,121,301	-	yrbG	HEPCGN_16845	0.58	-0.5
2,121,342	-	yrbG	HEPCGN_16845	0.62	-0.1
2,121,342	-	yrbG	HEPCGN_16845	0.62	+0.2
2,121,342	-	yrbG	HEPCGN_16845	0.62	+2.6
2,121,342	-	yrbG	HEPCGN_16845	0.62	+0.5
2,121,355	+	yrbG	HEPCGN_16845	0.63	+0.4
2,121,393	+	yrbG	HEPCGN_16845	0.67	-0.1
2,121,400	-	yrbG	HEPCGN_16845	0.68	+0.1
2,121,400	-	yrbG	HEPCGN_16845	0.68	+1.3
2,121,431	+	yrbG	HEPCGN_16845	0.71	-0.5
2,121,432	-	yrbG	HEPCGN_16845	0.71	+1.5
2,121,471	+	yrbG	HEPCGN_16845	0.75	-0.2
2,121,471	+	yrbG	HEPCGN_16845	0.75	-1.3
2,121,471	+	yrbG	HEPCGN_16845	0.75	-2.8
2,121,472	-	yrbG	HEPCGN_16845	0.75	+0.9
2,121,480	-	yrbG	HEPCGN_16845	0.76	+0.9
2,121,510	+	yrbG	HEPCGN_16845	0.79	+0.6
2,121,569	+	yrbG	HEPCGN_16845	0.85	-0.7
2,121,570	-	yrbG	HEPCGN_16845	0.85	-0.0
2,121,570	-	yrbG	HEPCGN_16845	0.85	+3.0
2,121,570	-	yrbG	HEPCGN_16845	0.85	-0.1
2,121,576	-	yrbG	HEPCGN_16845	0.86	+0.1
2,121,633	-				-0.0
2,121,706	-				-0.1
2,121,706	-				+0.0
2,121,715	+				-1.0
2,121,715	+				+0.3
2,121,715	+				+1.6
2,121,716	-				-0.4
2,121,716	-				-0.6
2,121,716	-				-1.0