Strain Fitness in Escherichia coli ECOR38 around HEPCGN_15280

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,819,051	+	yraQ	HEPCGN_15275	0.22	+0.7
1,819,053	+	yraQ	HEPCGN_15275	0.22	+0.2
1,819,054	-	yraQ	HEPCGN_15275	0.22	+0.4
1,819,148	+	yraQ	HEPCGN_15275	0.32	-0.1
1,819,158	+	yraQ	HEPCGN_15275	0.33	-1.9
1,819,161	+	yraQ	HEPCGN_15275	0.33	-0.6
1,819,162	-	yraQ	HEPCGN_15275	0.33	-0.1
1,819,188	+	yraQ	HEPCGN_15275	0.36	+0.6
1,819,188	+	yraQ	HEPCGN_15275	0.36	-0.4
1,819,196	+	yraQ	HEPCGN_15275	0.36	-1.3
1,819,238	+	yraQ	HEPCGN_15275	0.41	+0.2
1,819,241	+	yraQ	HEPCGN_15275	0.41	-0.5
1,819,241	+	yraQ	HEPCGN_15275	0.41	+0.5
1,819,242	-	yraQ	HEPCGN_15275	0.41	-1.2
1,819,242	-	yraQ	HEPCGN_15275	0.41	-0.5
1,819,246	-	yraQ	HEPCGN_15275	0.41	+0.8
1,819,272	+	yraQ	HEPCGN_15275	0.44	-0.5
1,819,273	-	yraQ	HEPCGN_15275	0.44	+0.4
1,819,331	+	yraQ	HEPCGN_15275	0.50	+0.2
1,819,331	+	yraQ	HEPCGN_15275	0.50	+3.3
1,819,331	+	yraQ	HEPCGN_15275	0.50	-0.1
1,819,331	+	yraQ	HEPCGN_15275	0.50	-0.4
1,819,331	+	yraQ	HEPCGN_15275	0.50	+0.4
1,819,332	-	yraQ	HEPCGN_15275	0.50	+1.9
1,819,333	+	yraQ	HEPCGN_15275	0.50	-0.1
1,819,333	+	yraQ	HEPCGN_15275	0.50	+1.2
1,819,334	-	yraQ	HEPCGN_15275	0.50	-1.2
1,819,334	-	yraQ	HEPCGN_15275	0.50	+0.3
1,819,401	-	yraQ	HEPCGN_15275	0.57	-0.1
1,819,434	-	yraQ	HEPCGN_15275	0.60	-0.2
1,819,443	+	yraQ	HEPCGN_15275	0.61	+0.7
1,819,472	-	yraQ	HEPCGN_15275	0.64	-0.9
1,819,482	-	yraQ	HEPCGN_15275	0.65	+0.7
1,819,509	+	yraQ	HEPCGN_15275	0.68	+1.2
1,819,530	-	yraQ	HEPCGN_15275	0.70	-1.6
1,819,533	+	yraQ	HEPCGN_15275	0.70	-0.1
1,819,599	+	yraQ	HEPCGN_15275	0.77	-2.5
1,819,600	-	yraQ	HEPCGN_15275	0.77	+0.7
1,819,600	-	yraQ	HEPCGN_15275	0.77	+0.7
1,819,745	+				-1.3
1,819,745	+				-0.2
1,819,752	+				-0.1
1,819,754	+				-0.2
1,819,827	-				-1.0
1,819,832	+				-0.2
1,819,832	+				+0.0
1,819,833	-				-0.5
1,819,836	+				-0.2
1,819,836	+				+1.0
1,819,837	-				+0.5
1,819,940	-				+0.3
1,819,977	+		HEPCGN_15280	0.12	-0.0
1,819,978	-		HEPCGN_15280	0.12	-2.3
1,820,002	-		HEPCGN_15280	0.19	-1.1
1,820,258	+				-0.4
1,820,278	+				-0.4
1,820,478	+	arsC	HEPCGN_15285	0.46	+0.5
1,820,609	+	arsC	HEPCGN_15285	0.77	+1.5
1,820,610	-	arsC	HEPCGN_15285	0.77	-3.8
1,820,614	-	arsC	HEPCGN_15285	0.78	-1.0
1,820,614	-	arsC	HEPCGN_15285	0.78	+1.1
1,820,614	-	arsC	HEPCGN_15285	0.78	-0.5
1,820,691	+				+0.0
1,820,692	-				-0.1
1,820,695	-				+0.4
1,820,720	+				+0.2
1,820,804	+				-0.7
1,820,804	+				-0.2
1,820,804	+				-0.8
1,820,805	-				+0.7
1,820,805	-				-0.3
1,820,820	+				+0.0
1,820,843	-				-0.4
1,820,912	-	arsB	HEPCGN_15290	0.15	-0.6
1,820,912	-	arsB	HEPCGN_15290	0.15	+0.4
1,820,921	+	arsB	HEPCGN_15290	0.16	+0.3
1,820,997	+	arsB	HEPCGN_15290	0.22	-0.4
1,821,007	-	arsB	HEPCGN_15290	0.22	-0.5
1,821,009	+	arsB	HEPCGN_15290	0.22	+0.1
1,821,098	+	arsB	HEPCGN_15290	0.29	-0.2
1,821,099	-	arsB	HEPCGN_15290	0.29	+0.4
1,821,140	+	arsB	HEPCGN_15290	0.33	-0.5
1,821,141	-	arsB	HEPCGN_15290	0.33	-0.2
1,821,141	-	arsB	HEPCGN_15290	0.33	-0.4
1,821,141	-	arsB	HEPCGN_15290	0.33	-0.2
1,821,141	-	arsB	HEPCGN_15290	0.33	-0.3
1,821,236	-	arsB	HEPCGN_15290	0.40	-0.1