Strain Fitness in Escherichia coli ECOR38 around HEPCGN_12860

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,320,281	-				-0.6
1,320,309	+				-0.7
1,320,832	+				-2.0
1,320,832	+				-1.8
1,320,832	+				-0.8
1,320,833	-				+0.3
1,320,833	-				+1.1
1,320,833	-				+0.0
1,320,835	+				-0.1
1,320,835	+				-0.4
1,320,835	+				-0.7
1,320,836	-				-0.0
1,320,836	-				-2.0
1,320,836	-				-0.1
1,320,836	-				-0.7
1,320,866	-				-0.0
1,320,932	-				+1.0
1,320,958	+				+0.2
1,321,069	+	trkH	HEPCGN_12860	0.16	-1.7
1,321,069	+	trkH	HEPCGN_12860	0.16	+0.8
1,321,069	+	trkH	HEPCGN_12860	0.16	+0.4
1,321,083	+	trkH	HEPCGN_12860	0.17	-0.8
1,321,084	-	trkH	HEPCGN_12860	0.17	-0.3
1,321,117	+	trkH	HEPCGN_12860	0.19	-1.3
1,321,117	+	trkH	HEPCGN_12860	0.19	-2.2
1,321,117	+	trkH	HEPCGN_12860	0.19	-0.9
1,321,147	+	trkH	HEPCGN_12860	0.21	-0.7
1,321,156	-	trkH	HEPCGN_12860	0.22	+2.1
1,321,280	+	trkH	HEPCGN_12860	0.30	-0.3
1,321,281	-	trkH	HEPCGN_12860	0.30	-1.1
1,321,378	+	trkH	HEPCGN_12860	0.37	-0.4
1,321,399	+	trkH	HEPCGN_12860	0.38	-1.3
1,321,399	+	trkH	HEPCGN_12860	0.38	-1.4
1,321,399	+	trkH	HEPCGN_12860	0.38	-1.3
1,321,402	-	trkH	HEPCGN_12860	0.39	-0.1
1,321,408	+	trkH	HEPCGN_12860	0.39	-2.0
1,321,408	+	trkH	HEPCGN_12860	0.39	+1.5
1,321,409	-	trkH	HEPCGN_12860	0.39	+1.0
1,321,409	-	trkH	HEPCGN_12860	0.39	+0.1
1,321,436	-	trkH	HEPCGN_12860	0.41	+0.3
1,321,436	-	trkH	HEPCGN_12860	0.41	-0.7
1,321,454	+	trkH	HEPCGN_12860	0.42	-0.4
1,321,505	-	trkH	HEPCGN_12860	0.46	-1.3
1,321,505	-	trkH	HEPCGN_12860	0.46	-1.5
1,321,514	+	trkH	HEPCGN_12860	0.46	-0.5
1,321,536	+	trkH	HEPCGN_12860	0.48	-1.0
1,321,536	+	trkH	HEPCGN_12860	0.48	-0.4
1,321,537	-	trkH	HEPCGN_12860	0.48	-1.9
1,321,540	+	trkH	HEPCGN_12860	0.48	-0.6
1,321,573	+	trkH	HEPCGN_12860	0.50	-0.4
1,321,573	+	trkH	HEPCGN_12860	0.50	-0.5
1,321,573	+	trkH	HEPCGN_12860	0.50	+2.6
1,321,574	-	trkH	HEPCGN_12860	0.50	-1.3
1,321,579	+	trkH	HEPCGN_12860	0.51	-1.8
1,321,579	+	trkH	HEPCGN_12860	0.51	-0.7
1,321,580	-	trkH	HEPCGN_12860	0.51	-0.4
1,321,580	-	trkH	HEPCGN_12860	0.51	+0.8
1,321,580	-	trkH	HEPCGN_12860	0.51	-0.2
1,321,637	-	trkH	HEPCGN_12860	0.55	-2.1
1,321,729	-	trkH	HEPCGN_12860	0.61	-2.3
1,321,813	-	trkH	HEPCGN_12860	0.67	-1.4
1,321,841	-	trkH	HEPCGN_12860	0.69	+0.8
1,322,000	-	trkH	HEPCGN_12860	0.80	-1.5
1,322,029	+	trkH	HEPCGN_12860	0.82	+2.4
1,322,140	+	trkH	HEPCGN_12860	0.89	-2.3
1,322,247	-				-2.4
1,322,247	-				-1.0
1,322,258	+				-1.5
1,322,309	-				-0.2
1,322,512	-	yigZ	HEPCGN_12865	0.29	+0.1
1,322,513	+	yigZ	HEPCGN_12865	0.29	-1.0
1,322,514	-	yigZ	HEPCGN_12865	0.30	-0.1
1,322,540	-	yigZ	HEPCGN_12865	0.34	-1.2
1,322,629	+	yigZ	HEPCGN_12865	0.48	+0.9
1,322,629	+	yigZ	HEPCGN_12865	0.48	-0.4
1,322,661	+	yigZ	HEPCGN_12865	0.53	+1.1
1,322,686	+	yigZ	HEPCGN_12865	0.58	+1.2
1,322,686	+	yigZ	HEPCGN_12865	0.58	-0.4
1,322,686	+	yigZ	HEPCGN_12865	0.58	-0.2
1,322,687	-	yigZ	HEPCGN_12865	0.58	+0.4
1,322,706	+	yigZ	HEPCGN_12865	0.61	+0.6
1,322,878	+	yigZ	HEPCGN_12865	0.89	+0.2
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.4
1,323,116	-	pepQ	HEPCGN_12870	0.13	-0.5
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.8
1,323,116	-	pepQ	HEPCGN_12870	0.13	-0.5
1,323,116	-	pepQ	HEPCGN_12870	0.13	-0.1
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.0
1,323,116	-	pepQ	HEPCGN_12870	0.13	-0.0
1,323,158	+	pepQ	HEPCGN_12870	0.16	+3.4
1,323,175	+	pepQ	HEPCGN_12870	0.17	+0.3
1,323,224	+	pepQ	HEPCGN_12870	0.21	-2.3
1,323,234	+	pepQ	HEPCGN_12870	0.22	+0.9