Strain Fitness in Escherichia coli ECOR38 around HEPCGN_10580

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
858,741	+	frdA	HEPCGN_10570	0.86	+0.9
858,742	-	frdA	HEPCGN_10570	0.86	+0.4
858,765	+	frdA	HEPCGN_10570	0.87	-0.4
858,765	+	frdA	HEPCGN_10570	0.87	-1.2
858,900	+				-0.9
858,900	+				-0.5
858,903	+				+0.2
858,918	+				-0.5
858,954	+				+0.2
858,973	-				-0.1
859,058	-				-0.2
859,067	+	frdB	HEPCGN_10575	0.11	+0.5
859,068	-	frdB	HEPCGN_10575	0.11	-1.3
859,068	-	frdB	HEPCGN_10575	0.11	-1.4
859,098	+	frdB	HEPCGN_10575	0.15	-0.8
859,116	-	frdB	HEPCGN_10575	0.17	+0.4
859,222	+	frdB	HEPCGN_10575	0.32	+0.9
859,242	-	frdB	HEPCGN_10575	0.34	-1.7
859,269	+	frdB	HEPCGN_10575	0.38	+0.1
859,269	+	frdB	HEPCGN_10575	0.38	-1.3
859,273	+	frdB	HEPCGN_10575	0.39	+0.3
859,384	+	frdB	HEPCGN_10575	0.54	+0.1
859,384	+	frdB	HEPCGN_10575	0.54	-0.7
859,385	-	frdB	HEPCGN_10575	0.54	+1.3
859,416	-	frdB	HEPCGN_10575	0.58	+0.7
859,454	+	frdB	HEPCGN_10575	0.63	+1.1
859,510	+	frdB	HEPCGN_10575	0.71	-0.1
859,527	-	frdB	HEPCGN_10575	0.73	-1.7
859,603	+	frdB	HEPCGN_10575	0.84	+0.2
859,603	+	frdB	HEPCGN_10575	0.84	-0.8
859,677	+				-0.0
859,748	+				-0.6
859,755	+				-0.3
859,755	+				+0.7
859,755	+				-0.7
859,755	+				+0.1
859,756	-				-0.2
859,756	-				+0.7
859,759	+				-0.7
859,759	+				-0.6
859,759	+				+0.2
859,759	+				-1.4
859,759	+				-0.7
859,809	+		HEPCGN_10580	0.19	-0.3
860,022	-		HEPCGN_10580	0.73	-1.0
860,101	+				+0.4
860,206	-	frdD	HEPCGN_10585	0.18	-0.7
860,293	+	frdD	HEPCGN_10585	0.42	-0.8
860,336	+	frdD	HEPCGN_10585	0.54	-0.0
860,379	-	frdD	HEPCGN_10585	0.66	-0.7
860,385	+	frdD	HEPCGN_10585	0.68	+0.0
860,386	-	frdD	HEPCGN_10585	0.68	-0.7
860,420	+	frdD	HEPCGN_10585	0.78	-1.0
860,490	+				-0.7
860,490	+				+0.5
860,497	+				-0.2
860,498	-				+0.1
860,528	+				+0.0
860,561	+				+0.8
860,562	-				+0.3
860,587	+				+0.7
860,588	-				-0.4
860,590	+				+0.9
860,590	+				+0.2
860,591	-				+0.6
860,639	+				+0.2
860,658	-				-0.9
860,669	-				+0.1
860,704	+	blaEC	HEPCGN_10590	0.13	-0.5
860,727	+	blaEC	HEPCGN_10590	0.15	+0.2
860,732	+	blaEC	HEPCGN_10590	0.15	+0.5
860,742	+	blaEC	HEPCGN_10590	0.16	-1.3
860,840	+	blaEC	HEPCGN_10590	0.25	+0.7
860,840	+	blaEC	HEPCGN_10590	0.25	-0.3
860,864	-	blaEC	HEPCGN_10590	0.27	+1.5
860,884	-	blaEC	HEPCGN_10590	0.28	-0.1
860,926	+	blaEC	HEPCGN_10590	0.32	+0.1
860,926	+	blaEC	HEPCGN_10590	0.32	-0.2
860,927	-	blaEC	HEPCGN_10590	0.32	-0.3
860,930	-	blaEC	HEPCGN_10590	0.32	-0.2
860,930	-	blaEC	HEPCGN_10590	0.32	-1.5
860,930	-	blaEC	HEPCGN_10590	0.32	+0.3
860,930	-	blaEC	HEPCGN_10590	0.32	-0.1
861,012	+	blaEC	HEPCGN_10590	0.40	-0.5
861,057	+	blaEC	HEPCGN_10590	0.44	-0.1