Strain Fitness in Escherichia coli ECOR38 around HEPCGN_10385

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
819,470	+	ulaA	HEPCGN_10380	0.56	+0.2
819,546	+	ulaA	HEPCGN_10380	0.62	-0.1
819,547	-	ulaA	HEPCGN_10380	0.62	-0.5
819,548	+	ulaA	HEPCGN_10380	0.62	-0.3
819,548	+	ulaA	HEPCGN_10380	0.62	-0.3
819,549	-	ulaA	HEPCGN_10380	0.62	-1.3
819,549	-	ulaA	HEPCGN_10380	0.62	+0.4
819,549	-	ulaA	HEPCGN_10380	0.62	+1.1
819,549	-	ulaA	HEPCGN_10380	0.62	+0.1
819,696	+	ulaA	HEPCGN_10380	0.72	+0.7
819,728	+	ulaA	HEPCGN_10380	0.75	-2.0
819,729	-	ulaA	HEPCGN_10380	0.75	+0.3
819,729	-	ulaA	HEPCGN_10380	0.75	+0.1
819,777	+	ulaA	HEPCGN_10380	0.78	-1.2
819,778	-	ulaA	HEPCGN_10380	0.78	+0.3
819,961	-				+0.2
820,056	+				+0.0
820,067	+				+0.2
820,103	-				-0.6
820,440	+				+0.5
820,497	+				-0.1
820,563	-	ulaG	HEPCGN_10385	0.12	-2.9
820,851	-	ulaG	HEPCGN_10385	0.39	-0.3
820,990	-	ulaG	HEPCGN_10385	0.52	-1.1
821,063	+	ulaG	HEPCGN_10385	0.59	-0.1
821,063	+	ulaG	HEPCGN_10385	0.59	-0.5
821,125	-	ulaG	HEPCGN_10385	0.65	+0.1
821,125	-	ulaG	HEPCGN_10385	0.65	-0.0
821,128	+	ulaG	HEPCGN_10385	0.65	+0.3
821,129	-	ulaG	HEPCGN_10385	0.65	-1.1
821,129	-	ulaG	HEPCGN_10385	0.65	+0.6
821,129	-	ulaG	HEPCGN_10385	0.65	+0.2
821,129	-	ulaG	HEPCGN_10385	0.65	-0.5
821,179	+	ulaG	HEPCGN_10385	0.70	-1.0
821,203	-	ulaG	HEPCGN_10385	0.72	+0.4
821,356	+	ulaG	HEPCGN_10385	0.86	-1.0
821,374	-	ulaG	HEPCGN_10385	0.88	-0.1
821,463	+				-0.5
821,497	+				+1.1
821,528	+				+0.9
821,547	+				+5.9
821,550	+				-0.4
821,570	+				-0.2
821,729	+	ulaR	HEPCGN_10390	0.16	+0.1
821,780	+	ulaR	HEPCGN_10390	0.23	-0.3
821,781	-	ulaR	HEPCGN_10390	0.23	-2.5
821,781	-	ulaR	HEPCGN_10390	0.23	+0.1
821,781	-	ulaR	HEPCGN_10390	0.23	-1.6
821,852	+	ulaR	HEPCGN_10390	0.32	-0.8
821,859	-	ulaR	HEPCGN_10390	0.33	-0.4
821,969	+	ulaR	HEPCGN_10390	0.48	-3.2
821,969	+	ulaR	HEPCGN_10390	0.48	-0.5
821,969	+	ulaR	HEPCGN_10390	0.48	-0.4
821,970	-	ulaR	HEPCGN_10390	0.48	+0.2
821,970	-	ulaR	HEPCGN_10390	0.48	+0.3
821,991	+	ulaR	HEPCGN_10390	0.51	-2.1
821,991	+	ulaR	HEPCGN_10390	0.51	-0.0
822,040	-	ulaR	HEPCGN_10390	0.57	+0.1
822,040	-	ulaR	HEPCGN_10390	0.57	-1.5
822,093	+	ulaR	HEPCGN_10390	0.64	-0.0
822,094	-	ulaR	HEPCGN_10390	0.64	-1.9
822,094	-	ulaR	HEPCGN_10390	0.64	+0.8
822,147	+	ulaR	HEPCGN_10390	0.71	-0.2
822,149	+	ulaR	HEPCGN_10390	0.72	-1.5
822,158	+	ulaR	HEPCGN_10390	0.73	-2.1
822,159	-	ulaR	HEPCGN_10390	0.73	-0.2
822,225	-	ulaR	HEPCGN_10390	0.82	-1.4
822,230	+	ulaR	HEPCGN_10390	0.82	+0.9
822,395	+				+0.8
822,396	-				-0.4
822,396	-				+0.9
822,396	-				+0.2
822,454	+	yjfP	HEPCGN_10395	0.13	+0.2