Strain Fitness in Escherichia coli ECOR38 around HEPCGN_09765

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
697,586	-				-0.2
697,586	-				+0.2
697,697	+	lpxM	HEPCGN_09760	0.18	-0.2
697,741	-	lpxM	HEPCGN_09760	0.23	+1.6
697,741	-	lpxM	HEPCGN_09760	0.23	-0.4
697,743	-	lpxM	HEPCGN_09760	0.23	+0.4
697,799	-	lpxM	HEPCGN_09760	0.29	-1.1
697,859	-	lpxM	HEPCGN_09760	0.35	-0.3
698,400	-				+0.3
698,473	+				-0.9
698,522	+				-0.9
698,561	-				+0.2
698,567	+				-1.2
698,590	-				+0.1
698,654	-	virK	HEPCGN_09765	0.13	+0.0
698,689	+	virK	HEPCGN_09765	0.16	-0.1
698,745	-	virK	HEPCGN_09765	0.22	-0.1
698,745	-	virK	HEPCGN_09765	0.22	-0.0
698,780	+	virK	HEPCGN_09765	0.26	-2.4
698,922	+	virK	HEPCGN_09765	0.41	-2.5
699,031	-	virK	HEPCGN_09765	0.52	-1.3
699,252	-	virK	HEPCGN_09765	0.76	-0.5
699,287	-	virK	HEPCGN_09765	0.79	+0.5
699,530	-				+0.7
699,536	-				+0.1
699,860	-	capU	HEPCGN_09770	0.34	+0.3
699,879	-	capU	HEPCGN_09770	0.36	-0.4
699,970	+	capU	HEPCGN_09770	0.44	-0.9
699,971	-	capU	HEPCGN_09770	0.44	+0.1
700,017	-	capU	HEPCGN_09770	0.49	-0.1
700,086	+	capU	HEPCGN_09770	0.55	-1.2
700,087	-	capU	HEPCGN_09770	0.55	-1.4
700,237	-	capU	HEPCGN_09770	0.69	-0.9
700,237	-	capU	HEPCGN_09770	0.69	-1.5
700,300	+	capU	HEPCGN_09770	0.75	+0.1