Strain Fitness in Escherichia coli ECOR38 around HEPCGN_08205

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
375,921	+	cdaR	HEPCGN_08200	0.31	+0.8
375,922	-	cdaR	HEPCGN_08200	0.31	-1.4
375,927	-	cdaR	HEPCGN_08200	0.32	+0.5
375,939	+	cdaR	HEPCGN_08200	0.33	-0.4
375,960	-	cdaR	HEPCGN_08200	0.35	+0.2
375,995	+	cdaR	HEPCGN_08200	0.38	+2.1
376,032	+	cdaR	HEPCGN_08200	0.41	+0.8
376,123	-	cdaR	HEPCGN_08200	0.49	+0.4
376,123	-	cdaR	HEPCGN_08200	0.49	-1.2
376,125	+	cdaR	HEPCGN_08200	0.49	-1.3
376,216	-	cdaR	HEPCGN_08200	0.57	-1.1
376,445	-	cdaR	HEPCGN_08200	0.77	+0.5
376,477	+	cdaR	HEPCGN_08200	0.79	+0.4
376,477	+	cdaR	HEPCGN_08200	0.79	+0.4
376,477	+	cdaR	HEPCGN_08200	0.79	-1.1
376,477	+	cdaR	HEPCGN_08200	0.79	-0.0
376,483	-	cdaR	HEPCGN_08200	0.80	-0.1
376,611	+				+0.3
376,633	+				+0.3
376,633	+				-0.2
376,633	+				-0.9
376,634	-				+0.5
376,665	+				-0.8
376,665	+				-1.6
376,717	-				+0.3
376,744	+				+0.8
376,745	-				+0.0
376,752	+				+0.7
376,756	+				+0.2
376,799	+				-0.5
376,799	+				+0.2
376,880	+				+0.8
376,880	+				+0.7
376,881	-				+0.0
377,086	+	degP	HEPCGN_08205	0.15	-0.3
377,086	+	degP	HEPCGN_08205	0.15	-2.5
377,227	+	degP	HEPCGN_08205	0.25	+1.1
377,228	-	degP	HEPCGN_08205	0.25	-0.6
377,348	+	degP	HEPCGN_08205	0.33	-1.0
377,593	+	degP	HEPCGN_08205	0.51	+1.1
377,593	+	degP	HEPCGN_08205	0.51	-0.5
377,593	+	degP	HEPCGN_08205	0.51	+0.7
377,731	-	degP	HEPCGN_08205	0.60	-0.3
377,854	+	degP	HEPCGN_08205	0.69	-1.6
377,878	+	degP	HEPCGN_08205	0.71	-0.1
377,922	+	degP	HEPCGN_08205	0.74	-0.6
378,094	+	degP	HEPCGN_08205	0.86	-0.7
378,125	+	degP	HEPCGN_08205	0.88	+0.0
378,125	+	degP	HEPCGN_08205	0.88	-3.1
378,126	-	degP	HEPCGN_08205	0.88	-0.2
378,126	-	degP	HEPCGN_08205	0.88	-0.7
378,126	-	degP	HEPCGN_08205	0.88	+0.0
378,298	-				-0.5
378,298	-				-0.8
378,490	+				-0.6
378,493	-				-0.6
378,493	-				+0.8
378,522	+				-0.3
378,523	-				-0.8
378,693	-	dgt	HEPCGN_08210	0.18	-1.0
378,713	+	dgt	HEPCGN_08210	0.19	-0.9
378,805	+	dgt	HEPCGN_08210	0.25	-0.9
378,916	+	dgt	HEPCGN_08210	0.32	-0.2
378,936	-	dgt	HEPCGN_08210	0.34	+0.4
378,940	-	dgt	HEPCGN_08210	0.34	+0.6
379,068	+	dgt	HEPCGN_08210	0.42	-1.3
379,164	-	dgt	HEPCGN_08210	0.49	+0.1
379,201	+	dgt	HEPCGN_08210	0.51	-0.2
379,219	-	dgt	HEPCGN_08210	0.52	+0.7
379,261	-	dgt	HEPCGN_08210	0.55	-0.7