Strain Fitness in Escherichia coli ECOR38 around HEPCGN_06290

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,125,212	-	relB	HEPCGN_06275	0.45	+3.2
1,125,440	-	relE	HEPCGN_06280	0.34	+0.0
1,125,479	+	relE	HEPCGN_06280	0.48	-0.8
1,125,501	-	relE	HEPCGN_06280	0.55	+0.9
1,125,529	+	relE	HEPCGN_06280	0.65	-0.2
1,125,532	-	relE	HEPCGN_06280	0.66	-0.3
1,125,539	+	relE	HEPCGN_06280	0.68	+0.3
1,125,598	+	relE	HEPCGN_06280	0.89	-0.7
1,125,598	+	relE	HEPCGN_06280	0.89	+1.4
1,125,598	+	relE	HEPCGN_06280	0.89	-0.7
1,125,600	+	relE	HEPCGN_06280	0.90	-0.1
1,125,602	+				+1.6
1,125,602	+				+1.0
1,126,053	-				-0.4
1,126,153	+	rem	HEPCGN_06290	0.32	+0.8
1,126,153	+	rem	HEPCGN_06290	0.32	+4.1
1,126,168	+	rem	HEPCGN_06290	0.38	+1.4
1,126,168	+	rem	HEPCGN_06290	0.38	+0.2
1,126,169	-	rem	HEPCGN_06290	0.38	+0.8
1,126,169	-	rem	HEPCGN_06290	0.38	-0.3
1,126,559	-				+0.5
1,126,681	+				+0.1
1,126,685	+				+0.9
1,126,757	+				-1.4
1,126,799	+	ydfU	HEPCGN_06295	0.12	-0.3
1,126,799	+	ydfU	HEPCGN_06295	0.12	-0.1
1,126,875	-	ydfU	HEPCGN_06295	0.19	+0.5
1,126,875	-	ydfU	HEPCGN_06295	0.19	+0.5
1,126,927	+	ydfU	HEPCGN_06295	0.24	-0.0
1,126,930	+	ydfU	HEPCGN_06295	0.25	+0.5
1,126,931	-	ydfU	HEPCGN_06295	0.25	+0.3
1,126,941	-	ydfU	HEPCGN_06295	0.26	+1.0
1,126,941	-	ydfU	HEPCGN_06295	0.26	-0.5
1,126,941	-	ydfU	HEPCGN_06295	0.26	-1.1
1,126,959	-	ydfU	HEPCGN_06295	0.27	-0.3
1,126,969	-	ydfU	HEPCGN_06295	0.28	+0.9
1,127,128	+	ydfU	HEPCGN_06295	0.44	+1.1
1,127,153	-	ydfU	HEPCGN_06295	0.46	+1.6
1,127,207	-	ydfU	HEPCGN_06295	0.51	+0.6