Strain Fitness in Escherichia coli ECOR38 around HEPCGN_03580

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
636,256	+	ybtA	HEPCGN_03575	0.18	-1.0
636,257	-	ybtA	HEPCGN_03575	0.18	-0.8
636,495	+	ybtA	HEPCGN_03575	0.43	+0.0
636,588	-	ybtA	HEPCGN_03575	0.53	+0.6
636,588	-	ybtA	HEPCGN_03575	0.53	+0.6
636,627	-	ybtA	HEPCGN_03575	0.57	-0.1
636,633	-	ybtA	HEPCGN_03575	0.57	-0.2
636,647	+	ybtA	HEPCGN_03575	0.59	+0.2
636,693	-	ybtA	HEPCGN_03575	0.63	+0.7
636,715	+	ybtA	HEPCGN_03575	0.66	-0.1
636,716	-	ybtA	HEPCGN_03575	0.66	+0.1
636,754	+	ybtA	HEPCGN_03575	0.70	+0.5
636,754	+	ybtA	HEPCGN_03575	0.70	+0.5
636,755	-	ybtA	HEPCGN_03575	0.70	+0.3
636,845	+	ybtA	HEPCGN_03575	0.79	+0.1
636,966	-				+0.5
637,052	+				+0.9
637,052	+				+0.7
637,082	-				+1.0
637,083	+				-1.0
637,083	+				-0.3
637,083	+				-1.1
637,087	+				+0.7
637,111	+				-1.3
637,203	+				-2.4
637,204	-				+0.7
637,295	+				-1.4
637,296	-				+0.3
637,436	+	ybtP	HEPCGN_03580	0.13	-0.6
637,436	+	ybtP	HEPCGN_03580	0.13	-1.1
637,517	+	ybtP	HEPCGN_03580	0.17	-0.3
637,611	-	ybtP	HEPCGN_03580	0.22	+0.2
637,614	+	ybtP	HEPCGN_03580	0.22	-0.0
637,779	+	ybtP	HEPCGN_03580	0.32	-0.5
637,780	-	ybtP	HEPCGN_03580	0.32	-0.7
637,798	-	ybtP	HEPCGN_03580	0.33	-0.2
638,023	+	ybtP	HEPCGN_03580	0.45	-3.0
638,023	+	ybtP	HEPCGN_03580	0.45	-0.4
638,039	-	ybtP	HEPCGN_03580	0.46	-0.1
638,164	-	ybtP	HEPCGN_03580	0.53	+0.7
638,164	-	ybtP	HEPCGN_03580	0.53	-1.7
638,387	-	ybtP	HEPCGN_03580	0.65	+0.7
638,439	+	ybtP	HEPCGN_03580	0.68	-0.5
638,439	+	ybtP	HEPCGN_03580	0.68	+0.1
638,517	+	ybtP	HEPCGN_03580	0.72	-0.4
638,561	+	ybtP	HEPCGN_03580	0.75	-0.0
638,562	-	ybtP	HEPCGN_03580	0.75	-0.9
638,598	+	ybtP	HEPCGN_03580	0.77	+0.9
638,677	-	ybtP	HEPCGN_03580	0.81	-0.8
638,680	-	ybtP	HEPCGN_03580	0.82	+0.1
638,852	+				+1.2
638,853	-				+0.5
638,895	+				+0.8
638,924	-				+0.6
638,944	+				+0.6
639,056	-				-3.3
639,174	+				-0.2
639,199	+	ybtQ	HEPCGN_03585	0.11	+1.9
639,254	+	ybtQ	HEPCGN_03585	0.14	+0.3
639,272	+	ybtQ	HEPCGN_03585	0.15	-0.4
639,419	+	ybtQ	HEPCGN_03585	0.23	-0.5
639,419	+	ybtQ	HEPCGN_03585	0.23	+0.0
639,419	+	ybtQ	HEPCGN_03585	0.23	+0.3
639,419	+	ybtQ	HEPCGN_03585	0.23	-0.2
639,420	-	ybtQ	HEPCGN_03585	0.23	-1.1
639,425	-	ybtQ	HEPCGN_03585	0.24	-0.4
639,555	-	ybtQ	HEPCGN_03585	0.31	+0.3
639,655	-	ybtQ	HEPCGN_03585	0.36	+1.9
639,726	+	ybtQ	HEPCGN_03585	0.40	-0.7