Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HEPCGN_02620 and HEPCGN_02625 are separated by 117 nucleotides HEPCGN_02625 and HEPCGN_02630 are separated by 213 nucleotides HEPCGN_02630 and btsS are separated by 221 nucleotides btsS and btsR overlap by 4 nucleotides btsR and yehS are separated by 46 nucleotides
HEPCGN_02620: HEPCGN_02620 - Ybl63, at 426,707 to 427,003
_02620
HEPCGN_02625: HEPCGN_02625 - damage-inducible protein DinI, at 427,121 to 427,369
_02625
HEPCGN_02630: HEPCGN_02630 - IS4 family transposase, at 427,583 to 427,651
_02630
HEPCGN_02635: btsS - two-component regulatory system sensor histidine kinase BtsS, at 427,873 to 429,558
btsS
HEPCGN_02640: btsR - two-component system response regulator BtsR, at 429,555 to 430,274
btsR
HEPCGN_02645: yehS - Uncharacterized protein YehS, at 430,321 to 430,791
yehS
Position (kb) 427
428
429
430 Strain fitness (log2 ratio) -2
-1
0
1
2 at 427.068 kb on - strand at 427.273 kb on + strand, within HEPCGN_02625 at 427.273 kb on + strand, within HEPCGN_02625 at 427.274 kb on - strand, within HEPCGN_02625 at 427.351 kb on + strand at 427.393 kb on - strand at 427.444 kb on - strand at 427.461 kb on + strand at 427.461 kb on + strand at 427.461 kb on + strand at 427.461 kb on + strand at 427.461 kb on + strand at 427.461 kb on + strand at 427.462 kb on - strand at 427.462 kb on - strand at 427.737 kb on - strand at 427.779 kb on - strand at 427.835 kb on + strand at 427.835 kb on + strand at 427.835 kb on + strand at 427.835 kb on + strand at 427.836 kb on - strand at 427.836 kb on - strand at 427.876 kb on + strand at 427.877 kb on - strand at 427.947 kb on + strand at 427.947 kb on + strand at 427.959 kb on - strand at 428.012 kb on - strand at 428.012 kb on - strand at 428.365 kb on + strand, within btsS at 428.366 kb on - strand, within btsS at 428.391 kb on + strand, within btsS at 428.392 kb on - strand, within btsS at 428.448 kb on + strand, within btsS at 428.448 kb on + strand, within btsS at 428.451 kb on - strand, within btsS at 428.676 kb on - strand, within btsS at 428.701 kb on + strand, within btsS at 428.701 kb on + strand, within btsS at 428.709 kb on - strand, within btsS at 428.951 kb on - strand, within btsS at 429.045 kb on + strand, within btsS at 429.046 kb on - strand, within btsS at 429.094 kb on + strand, within btsS at 429.179 kb on - strand, within btsS at 429.270 kb on + strand, within btsS at 429.403 kb on + strand at 429.459 kb on - strand at 429.514 kb on + strand at 429.568 kb on + strand at 429.568 kb on + strand at 429.590 kb on - strand at 429.664 kb on + strand, within btsR at 429.665 kb on - strand, within btsR at 429.781 kb on - strand, within btsR at 429.782 kb on + strand, within btsR at 429.783 kb on - strand, within btsR at 429.846 kb on + strand, within btsR at 429.971 kb on + strand, within btsR at 429.981 kb on - strand, within btsR at 430.090 kb on + strand, within btsR at 430.091 kb on - strand, within btsR at 430.110 kb on - strand, within btsR at 430.117 kb on + strand, within btsR at 430.118 kb on - strand, within btsR at 430.325 kb on + strand at 430.325 kb on + strand at 430.325 kb on + strand at 430.330 kb on - strand at 430.371 kb on + strand, within yehS at 430.371 kb on + strand, within yehS at 430.390 kb on - strand, within yehS at 430.446 kb on + strand, within yehS at 430.446 kb on + strand, within yehS at 430.447 kb on - strand, within yehS
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 427,068 - +1.0 427,273 + HEPCGN_02625 0.61 +0.6 427,273 + HEPCGN_02625 0.61 -0.5 427,274 - HEPCGN_02625 0.61 +0.0 427,351 + +1.0 427,393 - +0.1 427,444 - -0.6 427,461 + +0.4 427,461 + +0.4 427,461 + -0.1 427,461 + -0.9 427,461 + +1.2 427,461 + -0.5 427,462 - -0.0 427,462 - -0.2 427,737 - +0.2 427,779 - +0.8 427,835 + -1.1 427,835 + +0.3 427,835 + +0.4 427,835 + -0.4 427,836 - +0.6 427,836 - -2.0 427,876 + -0.6 427,877 - -0.9 427,947 + +0.6 427,947 + -0.0 427,959 - +0.2 428,012 - -1.0 428,012 - -0.3 428,365 + btsS HEPCGN_02635 0.29 +0.6 428,366 - btsS HEPCGN_02635 0.29 -0.1 428,391 + btsS HEPCGN_02635 0.31 -0.8 428,392 - btsS HEPCGN_02635 0.31 -1.0 428,448 + btsS HEPCGN_02635 0.34 -0.3 428,448 + btsS HEPCGN_02635 0.34 -0.4 428,451 - btsS HEPCGN_02635 0.34 -1.3 428,676 - btsS HEPCGN_02635 0.48 +0.9 428,701 + btsS HEPCGN_02635 0.49 +0.8 428,701 + btsS HEPCGN_02635 0.49 -1.7 428,709 - btsS HEPCGN_02635 0.50 -1.4 428,951 - btsS HEPCGN_02635 0.64 +0.3 429,045 + btsS HEPCGN_02635 0.70 -0.3 429,046 - btsS HEPCGN_02635 0.70 +2.0 429,094 + btsS HEPCGN_02635 0.72 +0.9 429,179 - btsS HEPCGN_02635 0.77 -0.5 429,270 + btsS HEPCGN_02635 0.83 +0.3 429,403 + +0.3 429,459 - +0.3 429,514 + +1.8 429,568 + +0.9 429,568 + +0.2 429,590 - +0.1 429,664 + btsR HEPCGN_02640 0.15 -0.3 429,665 - btsR HEPCGN_02640 0.15 +0.4 429,781 - btsR HEPCGN_02640 0.31 -1.1 429,782 + btsR HEPCGN_02640 0.32 -1.2 429,783 - btsR HEPCGN_02640 0.32 +0.4 429,846 + btsR HEPCGN_02640 0.40 -0.2 429,971 + btsR HEPCGN_02640 0.58 +0.3 429,981 - btsR HEPCGN_02640 0.59 -0.3 430,090 + btsR HEPCGN_02640 0.74 +0.7 430,091 - btsR HEPCGN_02640 0.74 -1.2 430,110 - btsR HEPCGN_02640 0.77 +1.9 430,117 + btsR HEPCGN_02640 0.78 -0.5 430,118 - btsR HEPCGN_02640 0.78 -1.3 430,325 + +0.1 430,325 + +1.3 430,325 + -0.5 430,330 - +0.1 430,371 + yehS HEPCGN_02645 0.11 -0.3 430,371 + yehS HEPCGN_02645 0.11 +1.5 430,390 - yehS HEPCGN_02645 0.15 +0.3 430,446 + yehS HEPCGN_02645 0.27 +1.9 430,446 + yehS HEPCGN_02645 0.27 -0.3 430,447 - yehS HEPCGN_02645 0.27 +1.0
Or see this region's nucleotide sequence