Strain Fitness in Escherichia coli ECOR38 around HEPCGN_00355
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
9 | + | +0.6 | |||
9 | + | +0.6 | |||
9 | + | +1.1 | |||
20 | + | +0.2 | |||
246 | + | HEPCGN_00355 | 0.68 | -0.6 | |
246 | + | HEPCGN_00355 | 0.68 | -1.6 | |
357 | + | +0.1 | |||
371 | - | -1.0 | |||
419 | + | +0.2 | |||
658 | - | -0.7 | |||
861 | - | -0.2 | |||
931 | + | -1.2 | |||
931 | + | -2.4 | |||
932 | - | +0.0 | |||
959 | + | HEPCGN_00365 | 0.11 | +0.0 | |
959 | + | HEPCGN_00365 | 0.11 | +1.6 | |
1,011 | - | HEPCGN_00365 | 0.16 | +0.3 | |
1,149 | + | HEPCGN_00365 | 0.27 | +0.4 | |
1,174 | + | HEPCGN_00365 | 0.29 | +0.1 | |
1,174 | + | HEPCGN_00365 | 0.29 | -0.6 | |
1,186 | + | HEPCGN_00365 | 0.30 | -0.6 | |
1,187 | - | HEPCGN_00365 | 0.30 | -1.4 | |
1,235 | + | HEPCGN_00365 | 0.34 | -0.4 | |
1,235 | + | HEPCGN_00365 | 0.34 | -0.1 | |
1,269 | + | HEPCGN_00365 | 0.36 | +0.3 | |
1,269 | + | HEPCGN_00365 | 0.36 | +1.3 | |
1,269 | + | HEPCGN_00365 | 0.36 | +0.3 | |
1,269 | + | HEPCGN_00365 | 0.36 | -0.6 | |
1,270 | - | HEPCGN_00365 | 0.37 | -1.8 | |
1,328 | + | HEPCGN_00365 | 0.41 | +0.6 |
Or see this region's nucleotide sequence