Strain Fitness in Escherichia coli ECOR38 around HEPCGN_25560

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,848,453	-	yciQ	HEPCGN_25555	0.63	+0.4
3,848,549	-	yciQ	HEPCGN_25555	0.68	+0.8
3,848,549	-	yciQ	HEPCGN_25555	0.68	-0.4
3,848,549	-	yciQ	HEPCGN_25555	0.68	+0.6
3,848,554	+	yciQ	HEPCGN_25555	0.68	+0.6
3,848,557	+	yciQ	HEPCGN_25555	0.68	+0.4
3,848,699	+	yciQ	HEPCGN_25555	0.76	-0.8
3,848,719	-	yciQ	HEPCGN_25555	0.77	+0.7
3,848,732	+	yciQ	HEPCGN_25555	0.78	+0.6
3,848,734	+	yciQ	HEPCGN_25555	0.78	-1.8
3,848,734	+	yciQ	HEPCGN_25555	0.78	-0.3
3,848,735	-	yciQ	HEPCGN_25555	0.78	-1.5
3,848,795	-	yciQ	HEPCGN_25555	0.81	-0.3
3,848,852	-	yciQ	HEPCGN_25555	0.84	+0.3
3,849,055	-				+0.7
3,849,080	+				+0.1
3,849,080	+				-0.1
3,849,105	-				-1.9
3,849,195	+				+1.1
3,849,195	+				+0.2
3,849,195	+				-0.7
3,849,200	+				-0.2
3,849,200	+				-0.7
3,849,201	-				+1.3
3,849,201	-				-1.9
3,849,204	-				+0.5
3,849,277	-				+0.6
3,849,364	+				+0.9
3,849,379	-				-0.1
3,849,430	+				+0.5
3,849,430	+				+1.5
3,849,430	+				-1.1
3,849,434	-				+0.6
3,849,578	+	rluB	HEPCGN_25560	0.24	-1.3
3,849,581	+	rluB	HEPCGN_25560	0.25	-0.4
3,849,582	-	rluB	HEPCGN_25560	0.25	-0.7
3,849,697	+	rluB	HEPCGN_25560	0.38	-1.3
3,849,701	-	rluB	HEPCGN_25560	0.38	+0.9
3,849,701	-	rluB	HEPCGN_25560	0.38	-0.6
3,849,701	-	rluB	HEPCGN_25560	0.38	-2.1
3,849,795	+	rluB	HEPCGN_25560	0.49	-0.2
3,849,796	-	rluB	HEPCGN_25560	0.49	-1.2
3,850,075	+	rluB	HEPCGN_25560	0.81	-0.9
3,850,080	-	rluB	HEPCGN_25560	0.82	-1.0
3,850,372	+				+0.9
3,850,422	-				-1.2
3,851,003	+		HEPCGN_25565	0.65	+0.0