Strain Fitness in Escherichia coli ECOR38 around HEPCGN_25550

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,845,695	+				-0.0
3,846,002	+	yciV	HEPCGN_25545	0.30	+1.4
3,846,009	-	yciV	HEPCGN_25545	0.31	-1.3
3,846,011	+	yciV	HEPCGN_25545	0.31	-0.4
3,846,011	+	yciV	HEPCGN_25545	0.31	-0.3
3,846,272	+	yciV	HEPCGN_25545	0.60	+0.9
3,846,277	+	yciV	HEPCGN_25545	0.61	-0.4
3,846,326	-	yciV	HEPCGN_25545	0.67	+0.1
3,846,326	-	yciV	HEPCGN_25545	0.67	+0.3
3,846,350	+	yciV	HEPCGN_25545	0.69	-1.3
3,846,350	+	yciV	HEPCGN_25545	0.69	+1.1
3,846,357	-	yciV	HEPCGN_25545	0.70	+0.4
3,846,581	-				-0.1
3,846,617	-				+0.1
3,846,691	+	yciO	HEPCGN_25550	0.12	+0.2
3,846,754	+	yciO	HEPCGN_25550	0.22	+0.1
3,846,782	-	yciO	HEPCGN_25550	0.27	-0.1
3,846,849	-	yciO	HEPCGN_25550	0.37	+0.4
3,846,905	+	yciO	HEPCGN_25550	0.46	+0.0
3,846,905	+	yciO	HEPCGN_25550	0.46	-1.2
3,846,905	+	yciO	HEPCGN_25550	0.46	-0.2
3,847,072	+	yciO	HEPCGN_25550	0.73	-0.7
3,847,234	-				+1.6
3,847,299	+				-0.1
3,847,300	-				-0.8
3,847,314	+				-0.0
3,847,314	+				-1.1
3,847,324	-				-0.2
3,847,459	+	yciQ	HEPCGN_25555	0.10	+0.5
3,847,459	+	yciQ	HEPCGN_25555	0.10	-0.3
3,847,530	-	yciQ	HEPCGN_25555	0.14	-1.0
3,847,558	+	yciQ	HEPCGN_25555	0.16	+0.7
3,847,647	-	yciQ	HEPCGN_25555	0.20	-0.7
3,847,752	-	yciQ	HEPCGN_25555	0.26	+0.1
3,847,753	+	yciQ	HEPCGN_25555	0.26	+0.7
3,847,841	+	yciQ	HEPCGN_25555	0.30	+0.2
3,847,943	-	yciQ	HEPCGN_25555	0.36	+0.4
3,848,032	-	yciQ	HEPCGN_25555	0.41	-0.2
3,848,052	+	yciQ	HEPCGN_25555	0.42	-0.6
3,848,052	+	yciQ	HEPCGN_25555	0.42	+1.1
3,848,053	-	yciQ	HEPCGN_25555	0.42	-1.1
3,848,054	+	yciQ	HEPCGN_25555	0.42	-0.1
3,848,054	+	yciQ	HEPCGN_25555	0.42	+0.6
3,848,088	+	yciQ	HEPCGN_25555	0.44	+0.3
3,848,140	-	yciQ	HEPCGN_25555	0.46	+0.6
3,848,140	-	yciQ	HEPCGN_25555	0.46	-0.9