Strain Fitness in Escherichia coli ECOR38 around HEPCGN_24725

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,696,717	+				-0.6
3,696,718	-				-1.3
3,696,732	+				+0.3
3,696,735	+				-0.1
3,696,736	-				+2.1
3,696,785	+	umuD	HEPCGN_24720	0.12	+0.4
3,696,889	+	umuD	HEPCGN_24720	0.36	+2.3
3,696,890	-	umuD	HEPCGN_24720	0.37	-0.6
3,696,915	+	umuD	HEPCGN_24720	0.43	+0.2
3,696,915	+	umuD	HEPCGN_24720	0.43	-0.2
3,696,966	+	umuD	HEPCGN_24720	0.55	-0.7
3,697,057	-	umuD	HEPCGN_24720	0.76	+0.6
3,697,105	-	umuD	HEPCGN_24720	0.88	+0.0
3,697,175	-				-0.8
3,697,302	-	umuC	HEPCGN_24725	0.12	-1.0
3,697,374	+	umuC	HEPCGN_24725	0.17	-0.9
3,697,383	+	umuC	HEPCGN_24725	0.18	+0.8
3,697,446	+	umuC	HEPCGN_24725	0.23	+0.2
3,697,488	-	umuC	HEPCGN_24725	0.26	+0.9
3,697,651	+	umuC	HEPCGN_24725	0.39	-0.3
3,697,678	+	umuC	HEPCGN_24725	0.41	+1.3
3,697,678	+	umuC	HEPCGN_24725	0.41	+0.1
3,697,679	-	umuC	HEPCGN_24725	0.41	+0.2
3,697,784	+	umuC	HEPCGN_24725	0.50	+1.0
3,697,895	+	umuC	HEPCGN_24725	0.58	+2.5
3,697,896	-	umuC	HEPCGN_24725	0.58	-0.2
3,697,934	+	umuC	HEPCGN_24725	0.61	+0.3
3,697,958	+	umuC	HEPCGN_24725	0.63	+0.2
3,697,962	+	umuC	HEPCGN_24725	0.64	-0.1
3,698,027	+	umuC	HEPCGN_24725	0.69	+0.2
3,698,031	-	umuC	HEPCGN_24725	0.69	+0.9
3,698,062	-	umuC	HEPCGN_24725	0.71	+0.3
3,698,118	-	umuC	HEPCGN_24725	0.76	-1.3
3,698,289	-	umuC	HEPCGN_24725	0.89	+0.3
3,698,294	-	umuC	HEPCGN_24725	0.90	+1.1
3,698,323	-				-1.8
3,698,387	+				+3.2
3,698,387	+				+1.0
3,698,421	+				+0.9
3,698,428	-				+0.4
3,698,428	-				+0.1
3,698,428	-				+0.4
3,698,542	+	dsbB	HEPCGN_24730	0.14	-0.9
3,698,556	-	dsbB	HEPCGN_24730	0.16	+0.2
3,698,649	-	dsbB	HEPCGN_24730	0.34	+0.9
3,698,762	+	dsbB	HEPCGN_24730	0.55	+0.1
3,698,762	+	dsbB	HEPCGN_24730	0.55	-0.4
3,698,764	+	dsbB	HEPCGN_24730	0.56	+0.5
3,698,764	+	dsbB	HEPCGN_24730	0.56	-0.7
3,698,765	-	dsbB	HEPCGN_24730	0.56	+0.6
3,698,765	-	dsbB	HEPCGN_24730	0.56	+0.0
3,698,765	-	dsbB	HEPCGN_24730	0.56	+0.7
3,698,765	-	dsbB	HEPCGN_24730	0.56	-0.3
3,698,785	-	dsbB	HEPCGN_24730	0.60	-0.3
3,698,788	+	dsbB	HEPCGN_24730	0.60	-0.8
3,698,999	+				+0.7
3,699,016	+				-0.7
3,699,017	-				-1.6
3,699,023	-				+1.1
3,699,124	+				-0.6
3,699,126	+				+2.1
3,699,175	-				+0.2
3,699,201	+				+1.1
3,699,232	+				+1.3
3,699,263	-				+1.0