Strain Fitness in Escherichia coli ECOR38 around HEPCGN_23855

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,557,773	+	flgL	HEPCGN_23845	0.56	+1.0
3,557,773	+	flgL	HEPCGN_23845	0.56	+2.3
3,558,019	+	flgL	HEPCGN_23845	0.82	+0.4
3,558,020	-	flgL	HEPCGN_23845	0.83	+0.0
3,558,095	+				-1.2
3,558,095	+				-0.1
3,558,130	+				+0.3
3,558,179	+				-0.9
3,558,197	+				-1.1
3,558,197	+				-0.9
3,558,198	-				-0.1
3,558,198	-				-0.0
3,558,277	+				+0.0
3,558,277	+				-0.2
3,558,278	-				+0.3
3,558,318	+				-0.3
3,558,324	-		HEPCGN_23850	0.11	+0.5
3,558,324	-		HEPCGN_23850	0.11	-0.9
3,558,433	-		HEPCGN_23850	0.37	-1.8
3,558,433	-		HEPCGN_23850	0.37	+0.4
3,558,495	-		HEPCGN_23850	0.51	-0.4
3,558,498	+		HEPCGN_23850	0.52	-0.1
3,558,498	+		HEPCGN_23850	0.52	+0.8
3,558,498	+		HEPCGN_23850	0.52	-1.3
3,558,516	+		HEPCGN_23850	0.56	+0.5
3,558,520	-		HEPCGN_23850	0.57	-0.1
3,558,520	-		HEPCGN_23850	0.57	+0.3
3,558,601	+		HEPCGN_23850	0.76	-0.5
3,558,601	+		HEPCGN_23850	0.76	+1.0
3,558,602	-		HEPCGN_23850	0.77	-0.3
3,558,602	-		HEPCGN_23850	0.77	-0.2
3,558,604	+		HEPCGN_23850	0.77	-0.1
3,558,605	-		HEPCGN_23850	0.77	+1.0
3,558,605	-		HEPCGN_23850	0.77	+1.0
3,558,621	-		HEPCGN_23850	0.81	+0.4
3,558,621	-		HEPCGN_23850	0.81	-0.5
3,558,622	+		HEPCGN_23850	0.81	-0.4
3,558,622	+		HEPCGN_23850	0.81	-0.8
3,558,622	+		HEPCGN_23850	0.81	-0.5
3,558,622	+		HEPCGN_23850	0.81	-0.2
3,558,622	+		HEPCGN_23850	0.81	-0.6
3,558,622	+		HEPCGN_23850	0.81	-0.3
3,558,623	-		HEPCGN_23850	0.81	-1.1
3,558,623	-		HEPCGN_23850	0.81	-0.2
3,558,623	-		HEPCGN_23850	0.81	-0.3
3,558,623	-		HEPCGN_23850	0.81	+0.6
3,558,626	+		HEPCGN_23850	0.82	+0.5
3,558,645	-		HEPCGN_23850	0.87	-0.1
3,558,695	+				-0.7
3,558,865	-		HEPCGN_23855	0.33	-0.4
3,559,060	+				-0.7
3,559,061	-				+0.2
3,559,064	+				-0.2
3,559,064	+				-0.3
3,559,065	-				-1.1
3,559,094	+				+0.9
3,559,095	-				-0.0
3,559,095	-				+0.3
3,559,095	-				-0.6
3,559,123	-				+2.5
3,559,137	-				+1.0
3,559,188	+				+0.8
3,559,192	+				-0.5
3,559,192	+				-1.6
3,559,192	+				+1.2
3,559,193	-				-0.2
3,559,371	-				-0.3
3,559,614	+	rne	HEPCGN_23860	0.13	-0.9
3,559,786	-	rne	HEPCGN_23860	0.19	+0.0
3,559,786	-	rne	HEPCGN_23860	0.19	+0.5
3,559,818	+	rne	HEPCGN_23860	0.20	-1.0