Strain Fitness in Escherichia coli ECOR38 around HEPCGN_23730

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,538,633	-				-0.2
3,538,633	-				-0.3
3,538,750	+	trhO	HEPCGN_23725	0.20	+1.1
3,538,788	+	trhO	HEPCGN_23725	0.24	+0.6
3,538,788	+	trhO	HEPCGN_23725	0.24	-1.6
3,538,789	-	trhO	HEPCGN_23725	0.24	-0.5
3,538,789	-	trhO	HEPCGN_23725	0.24	-0.2
3,538,817	-	trhO	HEPCGN_23725	0.26	+0.2
3,538,941	+	trhO	HEPCGN_23725	0.38	-2.5
3,538,942	-	trhO	HEPCGN_23725	0.38	+0.1
3,539,020	-	trhO	HEPCGN_23725	0.46	+2.5
3,539,020	-	trhO	HEPCGN_23725	0.46	+0.2
3,539,133	+	trhO	HEPCGN_23725	0.56	+0.0
3,539,134	-	trhO	HEPCGN_23725	0.57	-1.1
3,539,195	+	trhO	HEPCGN_23725	0.62	-0.3
3,539,223	-	trhO	HEPCGN_23725	0.65	+0.2
3,539,312	+	trhO	HEPCGN_23725	0.73	-0.4
3,539,313	-	trhO	HEPCGN_23725	0.74	-0.2
3,539,420	-	trhO	HEPCGN_23725	0.84	-0.7
3,539,537	+				+0.7
3,539,559	-				+1.8
3,539,634	+				+0.6
3,539,725	+	yceI	HEPCGN_23730	0.16	-0.6
3,539,726	-	yceI	HEPCGN_23730	0.16	-0.9
3,539,726	-	yceI	HEPCGN_23730	0.16	-1.6
3,539,962	+	yceI	HEPCGN_23730	0.57	-0.8
3,540,063	+	yceI	HEPCGN_23730	0.75	+0.3
3,540,063	+	yceI	HEPCGN_23730	0.75	-0.7
3,540,064	-	yceI	HEPCGN_23730	0.75	-0.5
3,540,064	-	yceI	HEPCGN_23730	0.75	-1.5
3,540,065	+	yceI	HEPCGN_23730	0.75	+0.9
3,540,073	+	yceI	HEPCGN_23730	0.76	+0.6
3,540,074	-	yceI	HEPCGN_23730	0.77	+0.1
3,540,074	-	yceI	HEPCGN_23730	0.77	-0.0
3,540,216	-				-0.7
3,540,308	-	yceJ	HEPCGN_23735	0.17	-0.4
3,540,318	-	yceJ	HEPCGN_23735	0.19	+0.7
3,540,320	+	yceJ	HEPCGN_23735	0.19	+0.1
3,540,321	-	yceJ	HEPCGN_23735	0.19	-0.4
3,540,431	-	yceJ	HEPCGN_23735	0.39	+1.3
3,540,482	+	yceJ	HEPCGN_23735	0.48	-1.1
3,540,483	-	yceJ	HEPCGN_23735	0.48	-2.2
3,540,486	+	yceJ	HEPCGN_23735	0.48	+0.7
3,540,487	-	yceJ	HEPCGN_23735	0.49	+0.1
3,540,487	-	yceJ	HEPCGN_23735	0.49	+0.4
3,540,587	-	yceJ	HEPCGN_23735	0.66	-0.3
3,540,729	-				+0.4
3,540,742	+				+0.7
3,540,779	-				+0.8