Strain Fitness in Escherichia coli ECOR38 around HEPCGN_22205

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,199,055	+	arnA	HEPCGN_22200	0.57	+0.0
3,199,055	+	arnA	HEPCGN_22200	0.57	+0.1
3,199,056	-	arnA	HEPCGN_22200	0.57	+1.9
3,199,056	-	arnA	HEPCGN_22200	0.57	+0.4
3,199,059	-	arnA	HEPCGN_22200	0.57	-0.6
3,199,214	-	arnA	HEPCGN_22200	0.65	-0.4
3,199,214	-	arnA	HEPCGN_22200	0.65	-0.4
3,199,214	-	arnA	HEPCGN_22200	0.65	+0.3
3,199,281	-	arnA	HEPCGN_22200	0.68	+0.2
3,199,362	-	arnA	HEPCGN_22200	0.72	+0.1
3,199,399	-	arnA	HEPCGN_22200	0.74	-0.0
3,199,420	-	arnA	HEPCGN_22200	0.75	+0.4
3,199,479	+	arnA	HEPCGN_22200	0.78	-3.0
3,199,611	-	arnA	HEPCGN_22200	0.85	-0.4
3,199,652	+	arnA	HEPCGN_22200	0.87	+0.2
3,199,728	-				-0.2
3,199,789	+				+0.1
3,199,789	+				+0.2
3,199,942	+				-1.5
3,199,942	+				+0.3
3,199,987	-				+0.7
3,199,987	-				+0.3
3,200,002	-				+0.3
3,200,063	+	arnC	HEPCGN_22205	0.15	-1.8
3,200,068	+	arnC	HEPCGN_22205	0.16	-1.7
3,200,068	+	arnC	HEPCGN_22205	0.16	+1.6
3,200,069	-	arnC	HEPCGN_22205	0.16	-0.1
3,200,138	-	arnC	HEPCGN_22205	0.23	-0.5
3,200,155	+	arnC	HEPCGN_22205	0.25	-1.3
3,200,155	+	arnC	HEPCGN_22205	0.25	-0.6
3,200,179	+	arnC	HEPCGN_22205	0.27	-0.1
3,200,180	-	arnC	HEPCGN_22205	0.28	+1.6
3,200,180	-	arnC	HEPCGN_22205	0.28	-1.2
3,200,180	-	arnC	HEPCGN_22205	0.28	+0.1
3,200,198	-	arnC	HEPCGN_22205	0.29	-0.0
3,200,218	-	arnC	HEPCGN_22205	0.31	+0.2
3,200,218	-	arnC	HEPCGN_22205	0.31	+0.4
3,200,239	+	arnC	HEPCGN_22205	0.34	+0.6
3,200,240	-	arnC	HEPCGN_22205	0.34	-0.4
3,200,398	+	arnC	HEPCGN_22205	0.50	-0.3
3,200,399	-	arnC	HEPCGN_22205	0.50	-0.5
3,200,407	-	arnC	HEPCGN_22205	0.51	-0.1
3,200,510	+	arnC	HEPCGN_22205	0.62	-0.3
3,200,594	-	arnC	HEPCGN_22205	0.70	+1.4
3,200,598	-	arnC	HEPCGN_22205	0.71	-1.0
3,200,654	-	arnC	HEPCGN_22205	0.76	-2.0
3,200,713	+	arnC	HEPCGN_22205	0.83	+0.4
3,200,830	+				+2.3
3,200,830	+				+0.5
3,200,833	-				-0.9
3,200,887	-				+0.1
3,200,887	-				-0.1
3,201,143	-	arnB	HEPCGN_22210	0.22	+1.6
3,201,145	+	arnB	HEPCGN_22210	0.22	+0.3
3,201,225	+	arnB	HEPCGN_22210	0.29	-1.4
3,201,226	-	arnB	HEPCGN_22210	0.29	+0.7
3,201,267	-	arnB	HEPCGN_22210	0.33	+0.4
3,201,322	+	arnB	HEPCGN_22210	0.38	-0.4
3,201,439	+	arnB	HEPCGN_22210	0.48	+0.2
3,201,476	-	arnB	HEPCGN_22210	0.51	-0.7
3,201,524	-	arnB	HEPCGN_22210	0.55	-0.2
3,201,524	-	arnB	HEPCGN_22210	0.55	-0.0
3,201,540	+	arnB	HEPCGN_22210	0.57	-1.1
3,201,541	-	arnB	HEPCGN_22210	0.57	+0.9
3,201,545	-	arnB	HEPCGN_22210	0.57	-0.2
3,201,616	+	arnB	HEPCGN_22210	0.63	+1.4
3,201,616	+	arnB	HEPCGN_22210	0.63	-1.1
3,201,637	-	arnB	HEPCGN_22210	0.65	+0.3
3,201,659	-	arnB	HEPCGN_22210	0.67	-0.1
3,201,709	+	arnB	HEPCGN_22210	0.71	+0.2
3,201,760	+	arnB	HEPCGN_22210	0.76	+0.6