Strain Fitness in Escherichia coli ECOR38 around HEPCGN_22125

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,183,034	+		HEPCGN_22120	0.48	-0.6
3,183,097	+		HEPCGN_22120	0.51	-0.4
3,183,098	-		HEPCGN_22120	0.51	+0.0
3,183,199	+		HEPCGN_22120	0.57	-0.3
3,183,299	+		HEPCGN_22120	0.63	-1.6
3,183,299	+		HEPCGN_22120	0.63	+0.3
3,183,348	-		HEPCGN_22120	0.65	+0.4
3,183,348	-		HEPCGN_22120	0.65	+0.6
3,183,451	+		HEPCGN_22120	0.71	+0.1
3,183,566	-		HEPCGN_22120	0.78	+0.1
3,183,567	+		HEPCGN_22120	0.78	-0.1
3,183,567	+		HEPCGN_22120	0.78	-3.1
3,183,616	+		HEPCGN_22120	0.81	+0.2
3,183,790	-				+0.2
3,183,797	+				-0.6
3,183,798	-				-0.4
3,183,853	-				-0.6
3,183,975	+				-0.3
3,183,975	+				-0.6
3,183,995	-				+0.3
3,184,338	+	elaD	HEPCGN_22125	0.26	-1.8
3,184,721	-	elaD	HEPCGN_22125	0.57	-1.9
3,184,888	-	elaD	HEPCGN_22125	0.71	-0.4
3,185,215	+				-0.7
3,185,327	+				+0.2
3,185,369	-				-0.1
3,185,495	-				-1.4
3,185,549	-		HEPCGN_22130	0.13	-0.6
3,185,549	-		HEPCGN_22130	0.13	-0.6
3,185,554	-		HEPCGN_22130	0.13	-0.1
3,185,596	-		HEPCGN_22130	0.18	-1.3
3,185,602	-		HEPCGN_22130	0.19	+0.4
3,185,602	-		HEPCGN_22130	0.19	-0.4
3,185,676	+		HEPCGN_22130	0.26	+0.0
3,185,722	-		HEPCGN_22130	0.31	+0.1
3,185,752	+		HEPCGN_22130	0.35	+0.7
3,185,756	+		HEPCGN_22130	0.35	+0.0
3,185,757	-		HEPCGN_22130	0.35	-0.2
3,185,812	+		HEPCGN_22130	0.41	-0.2
3,185,855	-		HEPCGN_22130	0.46	-0.9
3,185,899	-		HEPCGN_22130	0.50	-0.5
3,185,910	-		HEPCGN_22130	0.51	+0.4
3,185,910	-		HEPCGN_22130	0.51	-0.5
3,185,910	-		HEPCGN_22130	0.51	+0.0
3,186,072	-		HEPCGN_22130	0.69	-0.5
3,186,102	+		HEPCGN_22130	0.72	+1.4
3,186,199	-		HEPCGN_22130	0.82	+0.5
3,186,206	-		HEPCGN_22130	0.83	+1.9