Strain Fitness in Escherichia coli ECOR38 around HEPCGN_21000

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,950,771	+				-0.7
2,950,804	+				-1.2
2,950,804	+				+0.3
2,950,805	-				-0.7
2,950,862	+				-0.5
2,951,035	-	arsC	HEPCGN_20995	0.43	+0.2
2,951,037	-	arsC	HEPCGN_20995	0.44	-0.6
2,951,037	-	arsC	HEPCGN_20995	0.44	-0.0
2,951,073	+	arsC	HEPCGN_20995	0.54	+0.5
2,951,074	-	arsC	HEPCGN_20995	0.54	+1.1
2,951,135	+	arsC	HEPCGN_20995	0.71	-0.1
2,951,212	-				+1.2
2,951,280	-				-0.5
2,951,478	+	bepA	HEPCGN_21000	0.15	-0.2
2,951,505	-	bepA	HEPCGN_21000	0.17	+0.8
2,951,511	-	bepA	HEPCGN_21000	0.17	-1.2
2,951,518	+	bepA	HEPCGN_21000	0.18	-0.1
2,951,567	-	bepA	HEPCGN_21000	0.21	-0.2
2,951,567	-	bepA	HEPCGN_21000	0.21	-1.0
2,951,754	-	bepA	HEPCGN_21000	0.34	-0.4
2,951,870	-	bepA	HEPCGN_21000	0.42	+1.0
2,952,098	+	bepA	HEPCGN_21000	0.57	-0.2
2,952,221	+	bepA	HEPCGN_21000	0.66	+0.1
2,952,222	-	bepA	HEPCGN_21000	0.66	+0.5
2,952,229	-	bepA	HEPCGN_21000	0.66	+0.5
2,952,494	+	bepA	HEPCGN_21000	0.84	-1.1
2,952,497	+	bepA	HEPCGN_21000	0.85	+0.3
2,952,497	+	bepA	HEPCGN_21000	0.85	+0.0
2,952,499	+	bepA	HEPCGN_21000	0.85	-0.5
2,952,521	+	bepA	HEPCGN_21000	0.86	-0.1
2,952,557	-	bepA	HEPCGN_21000	0.89	+0.3
2,952,557	-	bepA	HEPCGN_21000	0.89	-1.8
2,952,657	+				+0.3
2,952,722	+				+0.4
2,952,723	-				+0.1
2,952,723	-				+0.6
2,952,729	+				-0.3
2,952,763	+				-0.6
2,952,774	-				+0.4
2,952,855	+				-0.4
2,952,935	-				+0.1
2,952,935	-				+0.3
2,952,935	-				-0.0
2,953,039	+				-0.2
2,953,069	+	perM	HEPCGN_21005	0.13	-0.3
2,953,069	+	perM	HEPCGN_21005	0.13	-0.2
2,953,152	+	perM	HEPCGN_21005	0.20	+0.7
2,953,172	-	perM	HEPCGN_21005	0.22	-1.8
2,953,173	+	perM	HEPCGN_21005	0.22	+0.4
2,953,173	+	perM	HEPCGN_21005	0.22	+1.7
2,953,174	-	perM	HEPCGN_21005	0.23	-0.7
2,953,174	-	perM	HEPCGN_21005	0.23	-0.9
2,953,179	+	perM	HEPCGN_21005	0.23	-0.2
2,953,180	-	perM	HEPCGN_21005	0.23	-1.9
2,953,321	+	perM	HEPCGN_21005	0.36	+0.9
2,953,342	+	perM	HEPCGN_21005	0.38	+0.8
2,953,419	+	perM	HEPCGN_21005	0.46	+0.3
2,953,420	-	perM	HEPCGN_21005	0.46	+0.6
2,953,428	-	perM	HEPCGN_21005	0.46	-1.5
2,953,568	+	perM	HEPCGN_21005	0.60	-0.2
2,953,568	+	perM	HEPCGN_21005	0.60	+0.2
2,953,568	+	perM	HEPCGN_21005	0.60	-0.1
2,953,569	-	perM	HEPCGN_21005	0.60	+0.1
2,953,569	-	perM	HEPCGN_21005	0.60	+2.3
2,953,569	-	perM	HEPCGN_21005	0.60	+0.1
2,953,569	-	perM	HEPCGN_21005	0.60	-0.6
2,953,569	-	perM	HEPCGN_21005	0.60	+0.3
2,953,629	+	perM	HEPCGN_21005	0.65	+0.2
2,953,629	+	perM	HEPCGN_21005	0.65	+0.1
2,953,647	-	perM	HEPCGN_21005	0.67	+0.2
2,953,687	+	perM	HEPCGN_21005	0.71	+0.1
2,953,688	-	perM	HEPCGN_21005	0.71	-0.2