Strain Fitness in Escherichia coli ECOR38 around HEPCGN_19290

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,606,761	+	pulJ	HEPCGN_19280	0.11	+0.1
2,606,761	+	pulJ	HEPCGN_19280	0.11	-0.5
2,606,762	-	pulJ	HEPCGN_19280	0.12	+0.3
2,606,762	-	pulJ	HEPCGN_19280	0.12	-0.1
2,606,797	+	pulJ	HEPCGN_19280	0.18	-0.1
2,606,798	-	pulJ	HEPCGN_19280	0.18	-0.8
2,606,825	+	pulJ	HEPCGN_19280	0.23	+0.2
2,606,895	+	pulJ	HEPCGN_19280	0.35	-0.2
2,607,185	+	pulJ	HEPCGN_19280	0.87	+0.3
2,607,186	-	pulJ	HEPCGN_19280	0.87	+0.1
2,607,186	-	pulJ	HEPCGN_19280	0.87	-0.0
2,607,298	+	ygdB	HEPCGN_19285	0.10	-0.8
2,607,325	-	ygdB	HEPCGN_19285	0.17	+1.0
2,607,476	+	ygdB	HEPCGN_19285	0.54	+0.1
2,607,510	+	ygdB	HEPCGN_19285	0.62	+0.2
2,607,510	+	ygdB	HEPCGN_19285	0.62	+0.8
2,607,532	-	ygdB	HEPCGN_19285	0.67	-0.5
2,607,758	+	ppdC	HEPCGN_19290	0.34	-0.2
2,607,912	-	ppdC	HEPCGN_19290	0.81	-1.0
2,607,912	-	ppdC	HEPCGN_19290	0.81	-1.1
2,607,970	+				+0.8
2,607,984	+				+0.4
2,607,984	+				-0.5
2,607,984	+				-1.3
2,608,101	+				-0.0
2,608,188	+				-0.0
2,608,397	-	recC	HEPCGN_19295	0.12	-1.8
2,608,405	+	recC	HEPCGN_19295	0.12	-0.5
2,608,509	+	recC	HEPCGN_19295	0.16	+1.8
2,608,552	+	recC	HEPCGN_19295	0.17	-1.3
2,608,620	+	recC	HEPCGN_19295	0.19	-1.7
2,608,620	+	recC	HEPCGN_19295	0.19	+1.2
2,608,621	-	recC	HEPCGN_19295	0.19	-1.8
2,608,683	+	recC	HEPCGN_19295	0.21	-3.4
2,608,737	+	recC	HEPCGN_19295	0.22	-0.9
2,608,806	-	recC	HEPCGN_19295	0.24	-1.9