Strain Fitness in Escherichia coli ECOR38 around HEPCGN_18550

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,453,906	+	hemW	HEPCGN_18540	0.68	+0.3
2,453,935	+	hemW	HEPCGN_18540	0.70	+0.2
2,453,959	-	hemW	HEPCGN_18540	0.72	+0.6
2,453,985	-	hemW	HEPCGN_18540	0.75	+0.1
2,453,985	-	hemW	HEPCGN_18540	0.75	-0.8
2,454,115	+	hemW	HEPCGN_18540	0.86	+0.4
2,454,244	+				+0.5
2,454,273	+				+0.2
2,454,273	+				+0.0
2,454,278	-				+0.0
2,454,426	+	rdgB	HEPCGN_18545	0.27	-1.3
2,454,488	+	rdgB	HEPCGN_18545	0.38	+1.9
2,454,489	-	rdgB	HEPCGN_18545	0.38	-0.6
2,454,490	+	rdgB	HEPCGN_18545	0.38	-0.5
2,454,491	-	rdgB	HEPCGN_18545	0.38	-0.2
2,454,596	+	rdgB	HEPCGN_18545	0.56	+0.1
2,454,608	+	rdgB	HEPCGN_18545	0.58	+0.2
2,454,609	-	rdgB	HEPCGN_18545	0.58	-2.4
2,454,638	-	rdgB	HEPCGN_18545	0.63	-0.6
2,454,858	+				-0.2
2,454,863	+				-0.6
2,454,864	-				+0.2
2,454,868	-				-0.3
2,454,868	-				-0.3
2,454,871	+				-0.5
2,454,875	+				+0.5
2,454,920	-	yggU	HEPCGN_18550	0.19	-0.8
2,455,056	-	yggU	HEPCGN_18550	0.65	+0.2
2,455,070	+	yggU	HEPCGN_18550	0.70	-0.4
2,455,071	-	yggU	HEPCGN_18550	0.70	+2.9
2,455,081	+	yggU	HEPCGN_18550	0.74	-0.4
2,455,082	-	yggU	HEPCGN_18550	0.74	+2.3
2,455,082	-	yggU	HEPCGN_18550	0.74	-0.7
2,455,110	+	yggU	HEPCGN_18550	0.84	-1.4
2,455,157	-				-0.2
2,455,222	-	yggT	HEPCGN_18555	0.12	+0.5
2,455,232	+	yggT	HEPCGN_18555	0.14	-1.1
2,455,232	+	yggT	HEPCGN_18555	0.14	+0.1
2,455,232	+	yggT	HEPCGN_18555	0.14	+1.2
2,455,337	+	yggT	HEPCGN_18555	0.32	+1.2
2,455,338	-	yggT	HEPCGN_18555	0.33	+1.2
2,455,477	-	yggT	HEPCGN_18555	0.57	-2.3
2,455,510	-	yggT	HEPCGN_18555	0.63	+1.2
2,455,512	-	yggT	HEPCGN_18555	0.63	+0.7
2,455,674	+				-1.2
2,455,676	+				+1.2
2,455,677	-				+1.9
2,455,887	+	yggS	HEPCGN_18560	0.21	+1.2
2,455,920	+	yggS	HEPCGN_18560	0.26	-1.3
2,455,924	+	yggS	HEPCGN_18560	0.27	-1.0
2,455,924	+	yggS	HEPCGN_18560	0.27	-1.0
2,455,924	+	yggS	HEPCGN_18560	0.27	+0.6
2,455,924	+	yggS	HEPCGN_18560	0.27	+0.8
2,455,924	+	yggS	HEPCGN_18560	0.27	-0.5
2,455,925	-	yggS	HEPCGN_18560	0.27	-1.0
2,455,968	+	yggS	HEPCGN_18560	0.33	-0.1
2,456,034	-	yggS	HEPCGN_18560	0.42	+1.7
2,456,138	+	yggS	HEPCGN_18560	0.57	+0.5