Strain Fitness in Escherichia coli ECOR38 around HEPCGN_17230

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,190,246	+	yhaB	HEPCGN_17225	0.85	+0.1
2,190,359	-				-0.9
2,190,362	-				+0.3
2,190,370	-				+0.5
2,190,566	+				-1.0
2,190,775	+				+0.3
2,191,116	-				+0.4
2,191,257	+	tdcA	HEPCGN_17230	0.15	+0.1
2,191,506	+	tdcA	HEPCGN_17230	0.42	+0.0
2,191,576	+	tdcA	HEPCGN_17230	0.49	-0.5
2,191,649	+	tdcA	HEPCGN_17230	0.57	-0.3
2,191,650	-	tdcA	HEPCGN_17230	0.57	+0.0
2,191,650	-	tdcA	HEPCGN_17230	0.57	+0.2
2,191,722	-	tdcA	HEPCGN_17230	0.65	-0.4
2,191,722	-	tdcA	HEPCGN_17230	0.65	-1.2
2,191,748	+	tdcA	HEPCGN_17230	0.67	-0.7
2,191,749	-	tdcA	HEPCGN_17230	0.67	-0.6
2,191,751	+	tdcA	HEPCGN_17230	0.68	+0.3
2,191,751	+	tdcA	HEPCGN_17230	0.68	-0.4
2,191,752	-	tdcA	HEPCGN_17230	0.68	-0.2
2,191,965	-				-0.3
2,192,125	+				+0.9
2,192,161	+				+0.2
2,192,609	+	tdcB	HEPCGN_17235	0.46	+0.1
2,192,673	-	tdcB	HEPCGN_17235	0.53	-0.0
2,192,741	-	tdcB	HEPCGN_17235	0.59	-0.3
2,192,747	-	tdcB	HEPCGN_17235	0.60	+0.3
2,193,050	+				-0.3
2,193,051	-				+0.7