Strain Fitness in Escherichia coli ECOR38 around HEPCGN_16345

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
2,019,850	+	zntR	HEPCGN_16330	0.72	-0.1
2,019,901	+	zntR	HEPCGN_16330	0.84	-0.1
2,019,912	-	zntR	HEPCGN_16330	0.86	-0.3
2,020,005	-				+1.0
2,020,043	+				+0.2
2,020,043	+				-0.1
2,020,044	-				-0.7
2,020,046	+				+0.6
2,020,073	-	arfA	HEPCGN_16335	0.21	-0.5
2,020,081	+	arfA	HEPCGN_16335	0.25	+1.0
2,020,081	+	arfA	HEPCGN_16335	0.25	-0.2
2,020,084	+	arfA	HEPCGN_16335	0.26	-0.0
2,020,084	+	arfA	HEPCGN_16335	0.26	-0.4
2,020,084	+	arfA	HEPCGN_16335	0.26	-0.3
2,020,084	+	arfA	HEPCGN_16335	0.26	-1.2
2,020,121	+	arfA	HEPCGN_16335	0.43	+0.2
2,020,140	+	arfA	HEPCGN_16335	0.52	-2.5
2,020,140	+	arfA	HEPCGN_16335	0.52	-0.4
2,020,141	-	arfA	HEPCGN_16335	0.53	-2.3
2,020,292	+	mscL	HEPCGN_16340	0.12	-1.3
2,020,304	-	mscL	HEPCGN_16340	0.15	-0.5
2,020,304	-	mscL	HEPCGN_16340	0.15	-0.3
2,020,358	+	mscL	HEPCGN_16340	0.28	-1.2
2,020,364	-	mscL	HEPCGN_16340	0.30	-0.1
2,020,509	-	mscL	HEPCGN_16340	0.65	+1.1
2,020,529	-	mscL	HEPCGN_16340	0.70	+0.5
2,020,654	+				+0.5
2,020,654	+				-1.3
2,020,681	-				-1.8
2,020,701	+				-0.6
2,020,767	-				+3.2
2,020,775	+				+0.0
2,020,779	-				-0.5
2,020,782	+				-0.8
2,020,852	+				+1.5
2,020,853	-				-0.7
2,020,853	-				-0.1
2,020,853	-				+0.5
2,021,060	-	trkA	HEPCGN_16345	0.20	+1.2
2,021,060	-	trkA	HEPCGN_16345	0.20	+1.3
2,021,096	-	trkA	HEPCGN_16345	0.23	-0.4
2,021,276	-	trkA	HEPCGN_16345	0.36	-0.3
2,021,372	-	trkA	HEPCGN_16345	0.43	-1.7
2,021,462	-	trkA	HEPCGN_16345	0.49	+0.1
2,021,525	-	trkA	HEPCGN_16345	0.54	-0.7
2,021,618	-	trkA	HEPCGN_16345	0.61	-1.3
2,021,674	-	trkA	HEPCGN_16345	0.65	-1.3
2,021,825	+	trkA	HEPCGN_16345	0.76	+0.2
2,021,826	-	trkA	HEPCGN_16345	0.76	+0.5
2,021,826	-	trkA	HEPCGN_16345	0.76	-0.4
2,021,899	-	trkA	HEPCGN_16345	0.81	-1.2
2,022,083	-				-0.9
2,022,201	+				-0.7
2,022,311	-	rsmB	HEPCGN_16350	0.10	-0.5
2,022,322	+	rsmB	HEPCGN_16350	0.11	-1.1
2,022,355	-	rsmB	HEPCGN_16350	0.14	+0.1
2,022,355	-	rsmB	HEPCGN_16350	0.14	-0.3
2,022,355	-	rsmB	HEPCGN_16350	0.14	-0.6
2,022,587	-	rsmB	HEPCGN_16350	0.32	-0.4
2,022,587	-	rsmB	HEPCGN_16350	0.32	-0.7
2,022,587	-	rsmB	HEPCGN_16350	0.32	+0.5
2,022,609	+	rsmB	HEPCGN_16350	0.33	+1.0
2,022,679	+	rsmB	HEPCGN_16350	0.39	+0.7
2,022,680	-	rsmB	HEPCGN_16350	0.39	-0.3
2,022,928	+	rsmB	HEPCGN_16350	0.58	+0.7