Strain Fitness in Escherichia coli ECOR38 around HEPCGN_15935

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,959,654	+				-0.5
1,959,720	-				-1.5
1,959,720	-				-1.1
1,959,720	-				+0.4
1,959,723	+				-1.5
1,959,724	-				-1.1
1,959,724	-				+0.5
1,959,789	+				-0.2
1,959,790	-				+0.2
1,959,843	+				-0.1
1,959,860	+				-0.5
1,959,969	-				+0.5
1,959,969	-				+0.2
1,959,973	+				-0.2
1,960,036	-				+0.6
1,960,036	-				-0.2
1,960,041	+				-1.4
1,960,042	-				-0.3
1,960,044	+				-2.7
1,960,128	-	aroK	HEPCGN_15930	0.14	-1.2
1,960,215	-	aroK	HEPCGN_15930	0.30	-1.9
1,960,577	-				-0.1
1,960,577	-				+1.2
1,960,588	+				-0.2
1,960,588	+				+0.7
1,960,589	-				+0.1
1,960,590	+				-0.1
1,960,590	+				+0.9
1,960,590	+				-0.1
1,960,590	+				-0.0
1,960,590	+				-0.3
1,960,590	+				-0.4
1,960,590	+				+0.3
1,960,591	-				-0.0
1,960,592	+				+1.9
1,960,593	-				-0.0
1,960,593	-				-0.6
1,960,593	-				+0.3
1,960,613	+				-0.3
1,960,613	+				+2.5
1,960,613	+				-0.1
1,960,613	+				+0.6
1,960,667	+				+0.3
1,960,667	+				-0.6
1,960,668	-				+0.5
1,960,671	+				-1.0
1,960,679	+				+0.1
1,960,679	+				+0.0
1,960,679	+				-2.1
1,960,802	-	aroB	HEPCGN_15935	0.15	-0.5
1,960,923	-	aroB	HEPCGN_15935	0.26	-1.2
1,960,925	+	aroB	HEPCGN_15935	0.27	-0.3
1,960,925	+	aroB	HEPCGN_15935	0.27	-1.9
1,960,926	-	aroB	HEPCGN_15935	0.27	+1.5
1,960,926	-	aroB	HEPCGN_15935	0.27	-2.3
1,961,106	+	aroB	HEPCGN_15935	0.43	-0.1
1,961,107	-	aroB	HEPCGN_15935	0.43	-2.5
1,961,283	+	aroB	HEPCGN_15935	0.60	-0.9
1,961,510	+	aroB	HEPCGN_15935	0.80	-0.5
1,961,511	-	aroB	HEPCGN_15935	0.80	-1.5
1,961,513	+	aroB	HEPCGN_15935	0.81	-0.8
1,961,513	+	aroB	HEPCGN_15935	0.81	+0.3
1,961,514	-	aroB	HEPCGN_15935	0.81	-1.9
1,961,516	-	aroB	HEPCGN_15935	0.81	-0.8
1,961,577	+	aroB	HEPCGN_15935	0.87	+1.0
1,961,588	+	aroB	HEPCGN_15935	0.88	-1.2
1,961,588	+	aroB	HEPCGN_15935	0.88	+0.7
1,961,629	+				+0.1
1,961,651	+				+0.4
1,961,651	+				-0.2
1,961,722	-				-1.5
1,961,758	+				-0.6
1,961,758	+				-0.7
1,961,761	+				+0.1
1,961,786	+				-0.0
1,961,802	-				-0.2
1,961,908	-				-0.1
1,962,121	+	damX	HEPCGN_15940	0.24	-0.5
1,962,122	-	damX	HEPCGN_15940	0.24	+0.3
1,962,123	+	damX	HEPCGN_15940	0.24	+1.7
1,962,123	+	damX	HEPCGN_15940	0.24	+0.3
1,962,124	-	damX	HEPCGN_15940	0.24	-0.0
1,962,124	-	damX	HEPCGN_15940	0.24	+0.1
1,962,124	-	damX	HEPCGN_15940	0.24	+1.1
1,962,459	+	damX	HEPCGN_15940	0.50	-0.5
1,962,460	-	damX	HEPCGN_15940	0.50	-0.6