Strain Fitness in Escherichia coli ECOR38 around HEPCGN_13250

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,392,268	+	rffT	HEPCGN_13245	0.11	-0.8
1,392,289	+	rffT	HEPCGN_13245	0.13	+1.1
1,392,292	+	rffT	HEPCGN_13245	0.14	-1.0
1,392,293	-	rffT	HEPCGN_13245	0.14	-0.5
1,392,447	-	rffT	HEPCGN_13245	0.28	-0.7
1,392,447	-	rffT	HEPCGN_13245	0.28	-0.7
1,392,447	-	rffT	HEPCGN_13245	0.28	+0.3
1,392,543	+	rffT	HEPCGN_13245	0.37	-0.9
1,392,543	+	rffT	HEPCGN_13245	0.37	+0.9
1,392,543	+	rffT	HEPCGN_13245	0.37	-0.3
1,392,557	-	rffT	HEPCGN_13245	0.38	+0.2
1,392,588	-	rffT	HEPCGN_13245	0.41	+0.2
1,392,632	-	rffT	HEPCGN_13245	0.45	-1.6
1,392,742	-	rffT	HEPCGN_13245	0.55	+0.3
1,392,810	-	rffT	HEPCGN_13245	0.61	+0.4
1,392,859	+	rffT	HEPCGN_13245	0.66	-0.9
1,392,859	+	rffT	HEPCGN_13245	0.66	-0.6
1,392,859	+	rffT	HEPCGN_13245	0.66	+0.1
1,392,860	-	rffT	HEPCGN_13245	0.66	+0.2
1,392,860	-	rffT	HEPCGN_13245	0.66	-0.2
1,392,862	-	rffT	HEPCGN_13245	0.66	-0.8
1,392,886	-	rffT	HEPCGN_13245	0.69	-1.2
1,392,904	+	rffT	HEPCGN_13245	0.70	-1.8
1,392,905	-	rffT	HEPCGN_13245	0.70	-0.1
1,392,905	-	rffT	HEPCGN_13245	0.70	-1.3
1,392,929	-	rffT	HEPCGN_13245	0.72	+0.4
1,393,081	+	rffT	HEPCGN_13245	0.87	+0.9
1,393,115	-	rffT	HEPCGN_13245	0.90	-2.6
1,393,205	+				-0.1
1,393,218	-				+0.5
1,393,218	-				+0.5
1,393,234	-				-0.1
1,393,244	-				-0.4
1,393,279	-				+0.9
1,393,280	+				-0.8
1,393,281	-				-2.4
1,393,281	-				-0.8
1,393,281	-				-1.5
1,393,281	-				-1.8
1,393,281	-				-0.7
1,393,281	-				-1.0
1,393,281	-				-2.5
1,393,281	-				+1.5
1,393,281	-				-0.5
1,393,290	+				-1.6
1,393,291	-				-0.5
1,393,292	+				-2.4
1,393,293	-				-2.6
1,393,293	-				-1.2
1,393,355	-	wzxE	HEPCGN_13250	0.11	-3.2
1,393,355	-	wzxE	HEPCGN_13250	0.11	-1.1
1,393,430	+	wzxE	HEPCGN_13250	0.17	+0.2
1,393,431	-	wzxE	HEPCGN_13250	0.17	-0.9
1,393,431	-	wzxE	HEPCGN_13250	0.17	-2.2
1,393,431	-	wzxE	HEPCGN_13250	0.17	-3.0
1,393,431	-	wzxE	HEPCGN_13250	0.17	-2.4
1,393,456	+	wzxE	HEPCGN_13250	0.19	-1.1
1,393,457	-	wzxE	HEPCGN_13250	0.19	-0.9
1,393,485	+	wzxE	HEPCGN_13250	0.21	+2.3
1,393,491	+	wzxE	HEPCGN_13250	0.22	-0.7
1,393,492	-	wzxE	HEPCGN_13250	0.22	-1.1
1,393,519	-	wzxE	HEPCGN_13250	0.24	-0.4
1,393,650	-	wzxE	HEPCGN_13250	0.34	-1.9
1,393,668	+	wzxE	HEPCGN_13250	0.36	-0.9
1,393,672	-	wzxE	HEPCGN_13250	0.36	-3.1
1,393,683	-	wzxE	HEPCGN_13250	0.37	-0.4
1,393,683	-	wzxE	HEPCGN_13250	0.37	-2.9
1,393,683	-	wzxE	HEPCGN_13250	0.37	-0.1
1,393,735	-	wzxE	HEPCGN_13250	0.41	-0.7
1,393,735	-	wzxE	HEPCGN_13250	0.41	-3.1
1,393,769	+	wzxE	HEPCGN_13250	0.44	-0.5
1,393,769	+	wzxE	HEPCGN_13250	0.44	+0.5
1,393,769	+	wzxE	HEPCGN_13250	0.44	-0.2
1,393,769	+	wzxE	HEPCGN_13250	0.44	-0.5
1,393,770	-	wzxE	HEPCGN_13250	0.44	-0.1
1,393,770	-	wzxE	HEPCGN_13250	0.44	-0.1
1,393,770	-	wzxE	HEPCGN_13250	0.44	-2.1
1,393,770	-	wzxE	HEPCGN_13250	0.44	-2.8
1,393,794	+	wzxE	HEPCGN_13250	0.46	-1.3
1,393,794	+	wzxE	HEPCGN_13250	0.46	-1.7
1,393,812	+	wzxE	HEPCGN_13250	0.47	-0.3
1,393,912	+	wzxE	HEPCGN_13250	0.55	+0.2
1,393,983	-	wzxE	HEPCGN_13250	0.61	+3.5
1,394,031	+	wzxE	HEPCGN_13250	0.65	-3.0
1,394,069	-	wzxE	HEPCGN_13250	0.68	-1.3
1,394,140	-	wzxE	HEPCGN_13250	0.73	+0.6
1,394,212	+	wzxE	HEPCGN_13250	0.79	+1.1
1,394,212	+	wzxE	HEPCGN_13250	0.79	-0.4
1,394,213	-	wzxE	HEPCGN_13250	0.79	-1.5
1,394,268	-	wzxE	HEPCGN_13250	0.84	-2.8
1,394,279	+	wzxE	HEPCGN_13250	0.84	-1.0
1,394,280	-	wzxE	HEPCGN_13250	0.85	+0.5
1,394,472	+				-0.4
1,394,473	-				-2.8
1,394,473	-				-2.2
1,394,473	-				-3.2
1,394,504	+				+1.9
1,394,504	+				+0.7
1,394,580	+				+0.7
1,394,580	+				+0.8
1,394,643	+	rffA	HEPCGN_13255	0.15	-0.6
1,394,720	-	rffA	HEPCGN_13255	0.22	+0.0
1,394,724	+	rffA	HEPCGN_13255	0.22	-0.2
1,394,724	+	rffA	HEPCGN_13255	0.22	+0.0
1,394,731	+	rffA	HEPCGN_13255	0.23	-1.9
1,394,732	-	rffA	HEPCGN_13255	0.23	-0.5
1,394,732	-	rffA	HEPCGN_13255	0.23	-1.3
1,394,732	-	rffA	HEPCGN_13255	0.23	-0.6
1,394,732	-	rffA	HEPCGN_13255	0.23	-0.6
1,394,732	-	rffA	HEPCGN_13255	0.23	+1.1
1,394,814	+	rffA	HEPCGN_13255	0.30	-0.9
1,394,815	-	rffA	HEPCGN_13255	0.30	+0.2
1,394,815	-	rffA	HEPCGN_13255	0.30	-1.2
1,394,907	+	rffA	HEPCGN_13255	0.38	+0.3
1,394,934	+	rffA	HEPCGN_13255	0.41	-0.5
1,394,935	-	rffA	HEPCGN_13255	0.41	+1.0
1,394,938	+	rffA	HEPCGN_13255	0.41	-0.7
1,395,079	+	rffA	HEPCGN_13255	0.53	-0.9
1,395,080	-	rffA	HEPCGN_13255	0.54	-0.0
1,395,091	+	rffA	HEPCGN_13255	0.55	-0.6
1,395,092	-	rffA	HEPCGN_13255	0.55	-0.3
1,395,124	-	rffA	HEPCGN_13255	0.57	+0.9
1,395,164	+	rffA	HEPCGN_13255	0.61	-0.8
1,395,165	-	rffA	HEPCGN_13255	0.61	+0.6
1,395,169	+	rffA	HEPCGN_13255	0.61	+0.5
1,395,169	+	rffA	HEPCGN_13255	0.61	-1.1
1,395,170	-	rffA	HEPCGN_13255	0.62	+0.3
1,395,170	-	rffA	HEPCGN_13255	0.62	+1.1
1,395,170	-	rffA	HEPCGN_13255	0.62	-2.4
1,395,190	+	rffA	HEPCGN_13255	0.63	-0.7
1,395,191	-	rffA	HEPCGN_13255	0.63	+0.3
1,395,193	+	rffA	HEPCGN_13255	0.64	+0.3
1,395,193	+	rffA	HEPCGN_13255	0.64	-0.7
1,395,193	+	rffA	HEPCGN_13255	0.64	-0.3
1,395,193	+	rffA	HEPCGN_13255	0.64	+0.4
1,395,193	+	rffA	HEPCGN_13255	0.64	+0.2
1,395,194	-	rffA	HEPCGN_13255	0.64	+5.4
1,395,194	-	rffA	HEPCGN_13255	0.64	+4.6
1,395,369	+	rffA	HEPCGN_13255	0.79	+0.5
1,395,369	+	rffA	HEPCGN_13255	0.79	+0.1
1,395,369	+	rffA	HEPCGN_13255	0.79	+0.8
1,395,369	+	rffA	HEPCGN_13255	0.79	-0.1