Strain Fitness in Escherichia coli ECOR38 around HEPCGN_12870

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
1,322,000	-	trkH	HEPCGN_12860	0.80	+0.3
1,322,029	+	trkH	HEPCGN_12860	0.82	+4.4
1,322,140	+	trkH	HEPCGN_12860	0.89	-2.6
1,322,247	-				-2.6
1,322,247	-				-0.2
1,322,258	+				+0.3
1,322,309	-				-0.1
1,322,512	-	yigZ	HEPCGN_12865	0.29	+0.3
1,322,513	+	yigZ	HEPCGN_12865	0.29	+0.7
1,322,514	-	yigZ	HEPCGN_12865	0.30	+0.4
1,322,540	-	yigZ	HEPCGN_12865	0.34	-0.5
1,322,629	+	yigZ	HEPCGN_12865	0.48	-0.2
1,322,629	+	yigZ	HEPCGN_12865	0.48	+0.4
1,322,661	+	yigZ	HEPCGN_12865	0.53	+0.1
1,322,686	+	yigZ	HEPCGN_12865	0.58	+0.3
1,322,686	+	yigZ	HEPCGN_12865	0.58	+1.9
1,322,686	+	yigZ	HEPCGN_12865	0.58	-0.2
1,322,687	-	yigZ	HEPCGN_12865	0.58	+0.0
1,322,706	+	yigZ	HEPCGN_12865	0.61	-0.4
1,322,878	+	yigZ	HEPCGN_12865	0.89	-0.5
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.5
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.7
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.8
1,323,116	-	pepQ	HEPCGN_12870	0.13	-1.9
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.4
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.4
1,323,116	-	pepQ	HEPCGN_12870	0.13	+0.7
1,323,158	+	pepQ	HEPCGN_12870	0.16	+3.1
1,323,175	+	pepQ	HEPCGN_12870	0.17	+0.3
1,323,224	+	pepQ	HEPCGN_12870	0.21	+0.8
1,323,234	+	pepQ	HEPCGN_12870	0.22	+2.7
1,323,327	-	pepQ	HEPCGN_12870	0.29	+0.3
1,323,389	-	pepQ	HEPCGN_12870	0.33	+0.5
1,323,389	-	pepQ	HEPCGN_12870	0.33	+0.4
1,323,397	+	pepQ	HEPCGN_12870	0.34	+0.2
1,323,397	+	pepQ	HEPCGN_12870	0.34	+0.5
1,323,447	+	pepQ	HEPCGN_12870	0.38	-0.6
1,323,448	-	pepQ	HEPCGN_12870	0.38	+0.1
1,323,448	-	pepQ	HEPCGN_12870	0.38	-0.5
1,323,470	-	pepQ	HEPCGN_12870	0.39	-0.2
1,323,518	-	pepQ	HEPCGN_12870	0.43	-0.2
1,323,525	-	pepQ	HEPCGN_12870	0.43	-0.5
1,323,526	+	pepQ	HEPCGN_12870	0.44	+1.8
1,323,527	-	pepQ	HEPCGN_12870	0.44	-0.2
1,323,592	+	pepQ	HEPCGN_12870	0.48	-0.0
1,323,592	+	pepQ	HEPCGN_12870	0.48	-0.6
1,323,592	+	pepQ	HEPCGN_12870	0.48	+0.8
1,323,593	-	pepQ	HEPCGN_12870	0.49	-0.1
1,323,593	-	pepQ	HEPCGN_12870	0.49	-0.5
1,323,618	-	pepQ	HEPCGN_12870	0.50	-1.2
1,323,637	+	pepQ	HEPCGN_12870	0.52	+0.1
1,323,637	+	pepQ	HEPCGN_12870	0.52	-1.6
1,323,638	-	pepQ	HEPCGN_12870	0.52	-0.4
1,323,642	+	pepQ	HEPCGN_12870	0.52	+0.7
1,323,643	-	pepQ	HEPCGN_12870	0.52	-0.3
1,323,676	+	pepQ	HEPCGN_12870	0.55	+1.8
1,323,683	+	pepQ	HEPCGN_12870	0.55	+1.4
1,323,684	-	pepQ	HEPCGN_12870	0.55	-0.2
1,323,684	-	pepQ	HEPCGN_12870	0.55	+0.5
1,323,809	-	pepQ	HEPCGN_12870	0.65	+0.7
1,323,896	-	pepQ	HEPCGN_12870	0.71	+0.6
1,324,127	+	pepQ	HEPCGN_12870	0.89	-0.9
1,324,181	+				+0.1
1,324,181	+				-0.0
1,324,185	+				+0.6
1,324,186	-				-0.3
1,324,186	-				+0.7
1,324,238	+				-0.2
1,324,238	+				-0.6
1,324,238	+				+0.6
1,324,238	+				-0.3
1,324,242	+				-0.6
1,324,242	+				-0.0
1,324,304	+				-0.1
1,324,304	+				+0.4
1,324,320	-				+0.7
1,324,473	+				-0.3
1,324,491	+				+0.5
1,324,491	+				+0.8
1,324,491	+				+0.4
1,324,492	-				-0.2
1,324,492	-				-1.8
1,324,621	+				-0.5
1,324,717	+	fadB	HEPCGN_12875	0.11	+0.5
1,324,717	+	fadB	HEPCGN_12875	0.11	+0.6
1,324,718	-	fadB	HEPCGN_12875	0.11	-0.2
1,324,921	+	fadB	HEPCGN_12875	0.21	+1.4
1,324,925	+	fadB	HEPCGN_12875	0.21	-0.2
1,324,926	-	fadB	HEPCGN_12875	0.21	+0.2
1,324,926	-	fadB	HEPCGN_12875	0.21	+0.1
1,324,926	-	fadB	HEPCGN_12875	0.21	+0.4
1,324,935	-	fadB	HEPCGN_12875	0.21	+0.4
1,324,935	-	fadB	HEPCGN_12875	0.21	-0.1
1,325,027	-	fadB	HEPCGN_12875	0.26	+0.1
1,325,231	-	fadB	HEPCGN_12875	0.35	-1.1